Overview Annotation GWAS Evidence Associated genes

P25419

Metabolite ID
P25419
Deionized mass
268.1292 Da
Average m/z
269.1366
Average RT
14.6852
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
12
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

12 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G037000 hypothetical protein AT1G28760:AT1G28760:guanosine-3',5'-bis (diphosphate) 3'-pyrophosphohydrolase, putative (DUF2215) 2Chr16:3515015–3520102 (-)8.242e-19
Glyma.09G162300 hypothetical protein NA 1Chr09:38644142–38648347 (+)9.069e-14
Glyma.16G034900 hypothetical protein NA 1Chr16:3273872–3276746 (+)1.469e-13
Glyma.16G035100 hypothetical protein AT2G46020:BRM:transcription regulatory protein SNF2 1Chr16:3320804–3332208 (-)8.242e-19
Glyma.16G035400 hypothetical protein AT2G01280:MEE65:Cyclin/Brf1-like TBP-binding protein__AT3G09360:AT3G09360:Cyclin/Brf1-like TBP-binding protein 1Chr16:3348514–3362406 (-)8.242e-19
Glyma.16G035800 hypothetical protein AT5G17840:AT5G17840:DnaJ/Hsp40 cysteine-rich domain superfamily protein 1Chr16:3385842–3389176 (-)8.242e-19
Glyma.16G036000 hypothetical protein AT5G17860:CAX7:calcium exchanger 7 1Chr16:3403032–3405426 (-)1.833e-12
Glyma.16G036100 hypothetical protein NA 1Chr16:3412168–3435136 (+)8.242e-19
Glyma.16G036300 hypothetical protein AT3G03720:CAT4:cationic amino acid transporter 4 1Chr16:3446149–3454272 (-)8.242e-19
Glyma.16G036400 hypothetical protein AT3G03740:BPM4:BTB-POZ and MATH domain 4 1Chr16:3459878–3464461 (-)8.242e-19
Glyma.16G036600 hypothetical protein NA 1Chr16:3482026–3483721 (+)8.242e-19
Glyma.16G036800 hypothetical protein NA 1Chr16:3490887–3497439 (+)8.242e-19