Overview Annotation GWAS Evidence Associated genes

P25336

Metabolite ID
P25336
Deionized mass
634.2437 Da
Average m/z
635.2513
Average RT
14.6750
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
6
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

6 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.14G032900 hypothetical protein AT4G23820:AT4G23820:Pectin lyase-like superfamily protein 2Chr14:2393952–2399559 (+)3.91e-15
Glyma.14G033200 hypothetical protein NA 1Chr14:2405393–2413069 (+)4.964e-13
Glyma.14G033400 hypothetical protein AT3G22330:PMH2:putative mitochondrial RNA helicase 2 1Chr14:2422873–2427873 (-)4.964e-13
Glyma.14G033600 hypothetical protein AT2G13370:CHR5:chromatin remodeling 5 1Chr14:2445694–2466124 (+)4.964e-13
Glyma.14G034000 hypothetical protein NA 1Chr14:2482399–2484675 (-)2.686e-11
Glyma.14G034200 hypothetical protein AT5G19420:AT5G19420:Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein_… 1Chr14:2493571–2501952 (-)1.181e-14