Overview Annotation GWAS Evidence Associated genes

P25315

Metabolite ID
P25315
Deionized mass
667.2791 Da
Average m/z
668.2863
Average RT
14.6712
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
12
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

12 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)4.602e-13
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)4.602e-13
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)4.246e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)7.217e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)4.663e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)1.094e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)3.859e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)3.859e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)3.859e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)3.859e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)4.534e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)6.039e-11