Overview Annotation GWAS Evidence Associated genes

P25310

Metabolite ID
P25310
Deionized mass
439.1844 Da
Average m/z
440.1950
Average RT
14.6704
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
16
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

16 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.05G182500 hypothetical protein AT5G65210:TGA1:bZIP transcription factor family protein 1Chr05:37029299–37037313 (+)4.61e-11
Glyma.05G182900 hypothetical protein NA 1Chr05:37056753–37057349 (-)4.61e-11
Glyma.05G183100 hypothetical protein AT5G64940:ATH13:ABC2 homolog 13 1Chr05:37059525–37070146 (-)4.61e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)3.02e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)5.95e-12
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)5.95e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.173e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)3.741e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.173e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.173e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)3.91e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)7.543e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)4.902e-11
Glyma.16G196400 hypothetical protein AT5G07270:XBAT33:uncharacterized protein 1Chr16:35782198–35790495 (-)5.574e-11
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr16:35831912–35835153 (+)9.287e-11
Glyma.16G196900 hypothetical protein NA 1Chr16:35841279–35846894 (-)1.411e-11