Overview Annotation GWAS Evidence Associated genes

P25303

Metabolite ID
P25303
Deionized mass
647.2618 Da
Average m/z
648.2732
Average RT
14.6688
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
24
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

24 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 3Chr16:35170253–35173950 (-)1.194e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)6.321e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)6.321e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)9.611e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.997e-11
Glyma.07G013400 hypothetical protein AT3G21310:AT3G21310:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 1Chr07:1028243–1033837 (-)9.059e-11
Glyma.07G013500 hypothetical protein NA 1Chr07:1036819–1041984 (-)9.059e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)8.273e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.31e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)3.132e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)3.132e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)3.132e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)3.132e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)2.148e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.315e-11
Glyma.13G184500 hypothetical protein NA 1Chr13:29829471–29834027 (+)8.762e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)4.33e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)6.292e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)6.644e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)3.447e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)8.573e-11
Glyma.16G146700 hypothetical protein NA 1Chr16:30755899–30759360 (-)8.573e-11
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)3.867e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)3.082e-11