Overview Annotation GWAS Evidence Associated genes

P25243

Metabolite ID
P25243
Deionized mass
324.2646 Da
Average m/z
325.2712
Average RT
14.6575
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
14
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

14 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 2Chr16:1877938–1879947 (-)4.111e-12
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.087e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)6.967e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)9.935e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)4.809e-13
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)4.809e-13
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)4.809e-13
Glyma.11G183800 hypothetical protein AT5G22450:AT5G22450:spectrin beta chain, brain 1Chr11:25162867–25173439 (-)1.606e-11
Glyma.13G198900 hypothetical protein NA 1Chr13:31269355–31270563 (-)6.367e-11
Glyma.13G200400 hypothetical protein NA 1Chr13:31403066–31411738 (+)3.891e-11
Glyma.13G200700 hypothetical protein NA 1Chr13:31431165–31434011 (-)4.301e-11
Glyma.13G200800 hypothetical protein AT2G21510:AT2G21510:DNAJ heat shock N-terminal domain-containing protein 1Chr13:31438634–31445721 (+)7.002e-13
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)7.425e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)5.045e-11