Overview Annotation GWAS Evidence Associated genes

P25006

Metabolite ID
P25006
Deionized mass
359.1598 Da
Average m/z
360.1672
Average RT
14.5838
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
8
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

8 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G294000 hypothetical protein NA 1Chr02:47237993–47240495 (+)2.01e-11
Glyma.02G294500 hypothetical protein AT5G50850:MAB1:Transketolase family protein 1Chr02:47272683–47277831 (-)7.818e-12
Glyma.06G118500 hypothetical protein NA 1Chr06:9644661–9650144 (-)1.036e-11
Glyma.06G118800 hypothetical protein NA 1Chr06:9666921–9667708 (+)1.036e-11
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)8.762e-12
Glyma.14G190100 hypothetical protein AT2G04280:AT2G04280:calcium ion-binding protein 1Chr14:45502008–45504459 (+)1.59e-12
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)6.253e-11
Glyma.16G189200 hypothetical protein AT3G48970:AT3G48970:Heavy metal transport/detoxification superfamily protein 1Chr16:35177846–35179798 (+)2.311e-11