Overview Annotation GWAS Evidence Associated genes

P24978

Metabolite ID
P24978
Deionized mass
212.0306 Da
Average m/z
213.0377
Average RT
14.5744
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
20
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

20 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G137600 hypothetical protein NA 2Chr16:29468438–29472890 (-)1.18e-11
Glyma.20G120200 hypothetical protein NA 2Chr20:36268998–36282456 (-)1.199e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.745e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.03e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.94e-11
Glyma.08G109000 SUB1 NA 1Chr08:8364770–8373803 (-)4.335e-12
Glyma.08G110000 hypothetical protein AT3G23840:AT3G23840:HXXXD-type acyl-transferase family protein 1Chr08:8438346–8442806 (-)4.335e-12
Glyma.08G110200 hypothetical protein NA 1Chr08:8471393–8473156 (+)8.813e-12
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)2.174e-11
Glyma.14G178600 hypothetical protein NA 1Chr14:43963455–43970275 (+)7.05e-11
Glyma.14G178700 hypothetical protein NA 1Chr14:43978407–43980052 (+)7.05e-11
Glyma.14G178800 hypothetical protein AT1G28210:ATJ1:DNAJ heat shock family protein 1Chr14:43987725–44003499 (-)7.05e-11
Glyma.16G137000 hypothetical protein NA 1Chr16:29418205–29421765 (-)4.623e-11
Glyma.16G137100 hypothetical protein NA 1Chr16:29421091–29421534 (+)4.623e-11
Glyma.16G138000 hypothetical protein AT4G36530:AT4G36530:alpha/beta-Hydrolases superfamily protein 1Chr16:29508469–29514252 (-)8.158e-12
Glyma.16G138800 hypothetical protein NA 1Chr16:29609432–29615000 (+)9.098e-14
Glyma.16G138900 hypothetical protein NA 1Chr16:29620531–29621995 (+)8.398e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)2.101e-11
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)6.046e-11
Glyma.20G129000 hypothetical protein NA 1Chr20:37038318–37040153 (+)1.889e-11