Overview Annotation GWAS Evidence Associated genes

P24949

Metabolite ID
P24949
Deionized mass
285.0828 Da
Average m/z
286.0901
Average RT
14.5675
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
14
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

14 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.15G140400 hypothetical protein NA 2Chr15:11495189–11495691 (+)2.864e-13
Glyma.15G140700 hypothetical protein NA 2Chr15:11520847–11522863 (-)4.673e-11
Glyma.06G039000 hypothetical protein AT1G47380:AT1G47380:Protein phosphatase 2C family protein 1Chr06:2949704–2954653 (+)6.049e-11
Glyma.11G119600 hypothetical protein AT2G16130:PMT2:polyol/monosaccharide transporter 2 1Chr11:9127497–9129972 (-)3.027e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.364e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.364e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)7.545e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)7.545e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)7.545e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)7.545e-11
Glyma.15G140500 hypothetical protein NA 1Chr15:11496139–11502209 (-)2.697e-11
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)4.089e-15
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)1.744e-11
Glyma.16G134500 hypothetical protein NA 1Chr16:29128092–29130458 (-)3.802e-11