Overview Annotation GWAS Evidence Associated genes

P24914

Metabolite ID
P24914
Deionized mass
550.2528 Da
Average m/z
551.2637
Average RT
14.5531
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
15
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

15 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)7.469e-11
Glyma.05G220900 hypothetical protein NA 1Chr05:40040654–40043504 (+)1.264e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)8.465e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.796e-16
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)9.387e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)6.267e-13
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)6.267e-13
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)5.805e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)9.155e-11
Glyma.16G196900 hypothetical protein NA 1Chr16:35841279–35846894 (-)4.481e-11
Glyma.20G013100 hypothetical protein NA 1Chr20:1134080–1135710 (-)1.895e-11
Glyma.20G018000 hypothetical protein AT1G70820:AT1G70820:phosphoglucomutase, putative / glucose phosphomutase 1Chr20:1840259–1844405 (-)9.15e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)1.341e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)2.227e-14
Glyma.20G112900 hypothetical protein AT2G39210:AT2G39210:Major facilitator superfamily protein 1Chr20:35498179–35500565 (-)9.145e-11