P24907
Metabolite ID
P24907
Deionized mass
204.0348 Da
Average m/z
205.0420
Average RT
14.5510
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
90
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
90 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 3 | Chr03:2423540–2428634 (-) | 2.451e-19 | |
| Glyma.03G251100 | hypothetical protein | AT3G04490:AT3G04490:exportin-4 protein | 2 | Chr03:44673965–44702804 (-) | 6.503e-13 | |
| Glyma.07G021800 | hypothetical protein | AT1G80920:J8:Chaperone DnaJ-domain superfamily protein | 2 | Chr07:1697119–1698666 (+) | 1.325e-13 | |
| Glyma.12G202200 | hypothetical protein | AT2G20860:LIP1:lipoic acid synthase 1 | 2 | Chr12:36267599–36271584 (+) | 9.398e-14 | |
| Glyma.12G204400 | hypothetical protein | AT4G03560:TPC1:two-pore channel 1 | 2 | Chr12:36473422–36498915 (+) | 1.056e-12 | |
| Glyma.13G134400 | hypothetical protein | AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein | 2 | Chr13:24677399–24693129 (-) | 1.422e-12 | |
| Glyma.13G135700 | hypothetical protein | NA | 2 | Chr13:24812720–24818735 (+) | 5.301e-14 | |
| Glyma.13G135800 | hypothetical protein | AT5G02800:CDL1:Protein kinase superfamily protein | 2 | Chr13:24820151–24823999 (-) | 5.301e-14 | |
| Glyma.14G093100 | hypothetical protein | NA | 2 | Chr14:8654730–8655892 (-) | 5.209e-12 | |
| Glyma.14G149300 | hypothetical protein | NA | 2 | Chr14:32235308–32258014 (+) | 6.107e-13 | |
| Glyma.02G086900 | hypothetical protein | AT3G24130:AT3G24130:Pectin lyase-like superfamily protein | 1 | Chr02:7553127–7557516 (-) | 8.125e-12 | |
| Glyma.02G303600 | hypothetical protein | NA | 1 | Chr02:47883626–47887124 (-) | 9.808e-11 | |
| Glyma.02G303700 | hypothetical protein | NA | 1 | Chr02:47892900–47896207 (+) | 9.808e-11 | |
| Glyma.02G304000 | hypothetical protein | AT1G51350:AT1G51350:ARM repeat superfamily protein | 1 | Chr02:47908136–47915999 (-) | 9.808e-11 | |
| Glyma.03G022100 | hypothetical protein | AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein | 1 | Chr03:2301675–2307263 (+) | 5.112e-11 | |
| Glyma.03G169700 | hypothetical protein | AT2G20240:TRM17:GPI-anchored adhesin-like protein, putative (DUF3741)__AT4G28760:TRM20:methyl-coenzyme M reductase II s… | 1 | Chr03:38442950–38448706 (+) | 6.865e-11 | |
| Glyma.03G177700 | hypothetical protein | NA | 1 | Chr03:39046772–39051158 (+) | 4.704e-13 | |
| Glyma.03G250400 | hypothetical protein | AT3G04470:AT3G04470:Ankyrin repeat family protein | 1 | Chr03:44616824–44621636 (-) | 3.236e-12 | |
| Glyma.03G252800 | hypothetical protein | AT5G18430:AT5G18430:GDSL-like Lipase/Acylhydrolase superfamily protein | 1 | Chr03:44849419–44851672 (+) | 6.809e-11 | |
| Glyma.04G116900 | hypothetical protein | NA | 1 | Chr04:13696275–13700803 (+) | 1.82e-11 | |
| Glyma.05G127800 | hypothetical protein | AT4G18240:SS4:starch synthase 4 | 1 | Chr05:32125404–32138244 (+) | 3.472e-11 | |
| Glyma.05G231800 | ALDH2C1 | aldehyde dehydrogenase family 2 member C1 | AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 | 1 | Chr05:40924505–40929251 (+) | 2.182e-11 |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 1.456e-13 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 1.782e-15 | |
| Glyma.06G125200 | hypothetical protein | AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 | 1 | Chr06:10209787–10215982 (+) | 7.241e-13 | |
| Glyma.06G125300 | hypothetical protein | AT5G24105:AGP41:arabinogalactan protein 41 | 1 | Chr06:10216506–10218901 (-) | 7.241e-13 | |
| Glyma.07G021100 | hypothetical protein | NA | 1 | Chr07:1647678–1650627 (+) | 1.842e-12 | |
| Glyma.07G021600 | hypothetical protein | AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase | 1 | Chr07:1673827–1680014 (-) | 1.842e-12 | |
| Glyma.07G021700 | hypothetical protein | NA | 1 | Chr07:1684537–1692320 (+) | 6.676e-13 | |
| Glyma.08G202000 | hypothetical protein | AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein | 1 | Chr08:16375907–16384294 (-) | 2.02e-12 | |
| Glyma.08G211800 | hypothetical protein | NA | 1 | Chr08:17104514–17105442 (-) | 2.783e-11 | |
| Glyma.10G238200 | hypothetical protein | AT5G07250:RBL3:RHOMBOID-like protein 3 | 1 | Chr10:46680865–46684088 (+) | 4.084e-13 | |
| Glyma.10G238300 | hypothetical protein | AT5G07240:IQD24:IQ-domain 24 | 1 | Chr10:46688122–46693051 (-) | 6.039e-11 | |
| Glyma.10G238700 | hypothetical protein | NA | 1 | Chr10:46721439–46725173 (+) | 6.039e-11 | |
| Glyma.10G239000 | hypothetical protein | NA | 1 | Chr10:46755702–46757579 (-) | 6.039e-11 | |
| Glyma.11G048300 | hypothetical protein | AT4G37640:ACA2:calcium ATPase 2 | 1 | Chr11:3601241–3607177 (+) | 1.124e-13 | |
| Glyma.11G049700 | hypothetical protein | NA | 1 | Chr11:3731308–3734534 (+) | 1.748e-17 | |
| Glyma.11G050300 | hypothetical protein | AT2G23093:AT2G23093:Major facilitator superfamily protein | 1 | Chr11:3765453–3771565 (+) | 8.723e-18 | |
| Glyma.11G050500 | hypothetical protein | AT5G67370:CGLD27:DUF1230 family protein (DUF1230) | 1 | Chr11:3778152–3782174 (+) | 8.723e-18 | |
| Glyma.11G050600 | hypothetical protein | NA | 1 | Chr11:3779988–3786583 (-) | 8.723e-18 | |
| Glyma.11G051600 | hypothetical protein | NA | 1 | Chr11:3857225–3859564 (-) | 8.723e-18 | |
| Glyma.11G058500 | hypothetical protein | AT4G37190:AT4G37190:plasma membrane, autoregulation-binding site, misato segment II, myosin-like, tubulin/FtsZ protein | 1 | Chr11:4417029–4423791 (-) | 4.68e-11 | |
| Glyma.11G064300 | hypothetical protein | AT4G36780:BEH2:BES1/BZR1 homolog 2 | 1 | Chr11:4849799–4851673 (+) | 1.333e-11 | |
| Glyma.11G165900 | hypothetical protein | AT5G58510:AT5G58510:Rab3 GTPase-activating protein catalytic protein | 1 | Chr11:15890687–15912099 (-) | 4.364e-11 | |
| Glyma.11G166100 | hypothetical protein | AT2G30110:UBA1:ubiquitin-activating enzyme 1 | 1 | Chr11:15941545–15948932 (+) | 4.364e-11 | |
| Glyma.11G166200 | hypothetical protein | NA | 1 | Chr11:15951003–15963149 (-) | 4.364e-11 | |
| Glyma.11G167100 | hypothetical protein | NA | 1 | Chr11:16310396–16317417 (+) | 4.364e-11 | |
| Glyma.11G167400 | hypothetical protein | NA | 1 | Chr11:16491689–16494364 (-) | 4.364e-11 | |
| Glyma.11G167800 | hypothetical protein | NA | 1 | Chr11:16649420–16666371 (+) | 4.364e-11 | |
| Glyma.11G169500 | hypothetical protein | NA | 1 | Chr11:18001828–18002310 (+) | 4.364e-11 | |
| Glyma.11G169700 | hypothetical protein | AT1G07110:F2KP:fructose-2,6-bisphosphatase | 1 | Chr11:18034188–18046104 (-) | 4.364e-11 | |
| Glyma.11G170100 | hypothetical protein | NA | 1 | Chr11:18127748–18139401 (-) | 4.364e-11 | |
| Glyma.11G170300 | hypothetical protein | AT3G47340:ASN1:glutamine-dependent asparagine synthase 1 | 1 | Chr11:18242402–18247271 (+) | 4.364e-11 | |
| Glyma.11G170700 | hypothetical protein | AT5G23880:CPSF100:cleavage and polyadenylation specificity factor 100 | 1 | Chr11:18313678–18328202 (-) | 4.364e-11 | |
| Glyma.11G170800 | hypothetical protein | NA | 1 | Chr11:18343004–18346283 (+) | 4.364e-11 | |
| Glyma.11G170900 | hypothetical protein | AT5G58610:AT5G58610:PHD finger transcription factor | 1 | Chr11:18345392–18359356 (-) | 4.364e-11 | |
| Glyma.11G171200 | hypothetical protein | AT5G58610:AT5G58610:PHD finger transcription factor | 1 | Chr11:18475119–18484515 (+) | 6.491e-12 | |
| Glyma.11G171500 | hypothetical protein | NA | 1 | Chr11:18629660–18631015 (+) | 6.491e-12 | |
| Glyma.11G171800 | hypothetical protein | NA | 1 | Chr11:18663180–18666591 (-) | 6.491e-12 | |
| Glyma.11G172200 | hypothetical protein | AT1G07110:F2KP:fructose-2,6-bisphosphatase | 1 | Chr11:18702580–18708310 (+) | 6.491e-12 | |
| Glyma.11G182600 | hypothetical protein | AT5G22400:AT5G22400:Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein | 1 | Chr11:24998933–25003549 (-) | 1.92e-12 | |
| Glyma.11G182700 | hypothetical protein | AT1G32250:AT1G32250:Calcium-binding EF-hand family protein | 1 | Chr11:25028353–25031056 (-) | 4.601e-12 | |
| Glyma.11G182800 | hypothetical protein | AT2G27460:AT2G27460:sec23/sec24 transport family protein | 1 | Chr11:25044939–25052549 (+) | 2.877e-11 | |
| Glyma.12G114500 | hypothetical protein | AT4G22930:PYR4:pyrimidin 4 | 1 | Chr12:11396572–11400825 (-) | 1.003e-11 | |
| Glyma.12G114900 | hypothetical protein | NA | 1 | Chr12:11457987–11462951 (-) | 1.003e-11 | |
| Glyma.12G202300 | hypothetical protein | NA | 1 | Chr12:36275438–36276838 (+) | 9.398e-14 | |
| Glyma.12G202400 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:36289704–36295084 (-) | 3.57e-12 | |
| Glyma.12G204000 | hypothetical protein | AT1G03687:AT1G03687:DTW domain-containing protein | 1 | Chr12:36428558–36432835 (+) | 1.056e-12 | |
| Glyma.12G204600 | hypothetical protein | AT4G28310:AT4G28310:microtubule-associated protein | 1 | Chr12:36504234–36505245 (+) | 4.209e-11 | |
| Glyma.13G134300 | hypothetical protein | NA | 1 | Chr13:24664171–24665742 (-) | 1.422e-12 | |
| Glyma.13G135300 | hypothetical protein | NA | 1 | Chr13:24770681–24773826 (+) | 4.895e-12 | |
| Glyma.13G135400 | hypothetical protein | AT5G12130:PDE149:integral membrane TerC family protein | 1 | Chr13:24786242–24791938 (+) | 4.895e-12 | |
| Glyma.13G135500 | hypothetical protein | AT5G02780:GSTL1:glutathione transferase lambda 1 | 1 | Chr13:24798567–24801567 (+) | 5.301e-14 | |
| Glyma.14G069500 | hypothetical protein | AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 | 1 | Chr14:5822246–5825628 (-) | 5.076e-11 | |
| Glyma.14G094900 | hypothetical protein | AT1G60960:IRT3:iron regulated transporter 3 | 1 | Chr14:8824846–8827258 (-) | 1.781e-12 | |
| Glyma.14G148800 | hypothetical protein | AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein | 1 | Chr14:32154755–32157298 (+) | 6.107e-13 | |
| Glyma.15G121100 | hypothetical protein | NA | 1 | Chr15:9567797–9570248 (+) | 7.532e-11 | |
| Glyma.15G121500 | hypothetical protein | AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein | 1 | Chr15:9602794–9615281 (+) | 7.532e-11 | |
| Glyma.15G121800 | hypothetical protein | NA | 1 | Chr15:9643746–9648073 (+) | 7.533e-11 | |
| Glyma.15G124500 | MLO-like protein 13 | AT4G24250:MLO13:Seven transmembrane MLO family protein | 1 | Chr15:9888761–9894068 (-) | 4.826e-12 | |
| Glyma.16G025300 | hypothetical protein | NA | 1 | Chr16:2438122–2440528 (-) | 6.158e-11 | |
| Glyma.16G025400 | hypothetical protein | AT2G46430:CNGC3:cyclic nucleotide gated channel 3 | 1 | Chr16:2443212–2450834 (-) | 6.158e-11 | |
| Glyma.16G069300 | hypothetical protein | AT3G01600:NAC044:NAC domain containing protein 44 | 1 | Chr16:6914905–6920531 (+) | 3.601e-11 | |
| Glyma.16G139500 | hypothetical protein | AT5G66550:AT5G66550:Maf-like protein | 1 | Chr16:29686243–29690410 (-) | 7.173e-11 | |
| Glyma.17G064000 | hypothetical protein | AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein | 1 | Chr17:4924830–4930155 (-) | 1.388e-11 | |
| Glyma.17G064200 | hypothetical protein | AT5G57500:AT5G57500:Galactosyltransferase family protein | 1 | Chr17:4943412–4944357 (-) | 1.388e-11 | |
| Glyma.19G218100 | hypothetical protein | AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 | 1 | Chr19:47082133–47085750 (+) | 4.071e-16 | |
| Glyma.20G114400 | hypothetical protein | AT1G68585:AT1G68585:uncharacterized protein | 1 | Chr20:35614355–35616709 (-) | 8.64e-11 | |
| Glyma.20G120200 | hypothetical protein | NA | 1 | Chr20:36268998–36282456 (-) | 6.099e-11 | |
| Glyma.20G211500 | hypothetical protein | AT3G63410:APG1:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 1 | Chr20:44820994–44827443 (+) | 2.457e-11 |