Overview Annotation GWAS Evidence Associated genes

P24892

Metabolite ID
P24892
Deionized mass
263.1503 Da
Average m/z
264.1575
Average RT
14.5467
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
13
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

13 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)7.834e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.324e-11
Glyma.11G237700 hypothetical protein NA 1Chr11:33203513–33233708 (-)2.057e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)5.507e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)5.212e-18
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)2.795e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.275e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)5.363e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.275e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.275e-12
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)1.624e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)1.624e-11
Glyma.18G251000 hypothetical protein NA 1Chr18:53738009–53740714 (+)4.146e-12