P24883
Metabolite ID
P24883
Deionized mass
994.1749 Da
Average m/z
498.0889
Average RT
14.5446
Adduct
[M+2H]2+
Association scope
Overlapping genes only
Associated genes
82
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
82 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.19G027000 | hypothetical protein | NA | 4 | Chr19:3335896–3343744 (+) | 1.594e-11 | |
| Glyma.16G118100 | hypothetical protein | AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein | 3 | Chr16:26324650–26336836 (+) | 1.297e-11 | |
| Glyma.04G107400 | hypothetical protein | AT2G20510:TIM44-1:translocase inner membrane subunit 44-1__AT2G36070:TIM44-2:translocase inner membrane subunit 44-2 | 2 | Chr04:11276495–11288391 (+) | 1.971e-12 | |
| Glyma.12G203700 | hypothetical protein | AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase | 2 | Chr12:36406747–36413696 (+) | 1.603e-12 | |
| Glyma.12G204400 | hypothetical protein | AT4G03560:TPC1:two-pore channel 1 | 2 | Chr12:36473422–36498915 (+) | 9.107e-14 | |
| Glyma.14G149300 | hypothetical protein | NA | 2 | Chr14:32235308–32258014 (+) | 7.533e-11 | |
| Glyma.16G031600 | hypothetical protein | NA | 2 | Chr16:2964569–2985013 (+) | 6.467e-12 | |
| Glyma.19G026600 | hypothetical protein | AT4G13700:PAP23:purple acid phosphatase 23 | 2 | Chr19:3303658–3312907 (-) | 1.594e-11 | |
| Glyma.20G021900 | hypothetical protein | AT5G37340:AT5G37340:ZPR1 zinc-finger domain protein | 2 | Chr20:2227480–2247807 (+) | 1.667e-11 | |
| Glyma.03G001500 | B15-3-5 | AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase | 1 | Chr03:169480–172727 (+) | 2.003e-13 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 7.874e-12 | |
| Glyma.04G084200 | hypothetical protein | AT2G25830:AT2G25830:YebC-like protein | 1 | Chr04:7137351–7146570 (-) | 2.465e-11 | |
| Glyma.04G103500 | hypothetical protein | AT1G78110:AT1G78110:nucleolar GTP-binding protein | 1 | Chr04:9624916–9626694 (-) | 5.514e-11 | |
| Glyma.04G107100 | hypothetical protein | AT1G22060:AT1G22060:sporulation-specific protein | 1 | Chr04:11239281–11250948 (-) | 1.971e-12 | |
| Glyma.04G107300 | hypothetical protein | AT1G36310:AT1G36310:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 1 | Chr04:11253648–11256731 (+) | 1.971e-12 | |
| Glyma.04G110600 | hypothetical protein | NA | 1 | Chr04:12199550–12200299 (-) | 1.971e-12 | |
| Glyma.04G110700 | hypothetical protein | AT1G72190:AT1G72190:D-isomer specific 2-hydroxyacid dehydrogenase family protein | 1 | Chr04:12206027–12222024 (-) | 1.971e-12 | |
| Glyma.04G112200 | hypothetical protein | AT5G51750:SBT1.3:subtilase 1.3 | 1 | Chr04:12562882–12565006 (+) | 3.262e-15 | |
| Glyma.05G127500 | hypothetical protein | NA | 1 | Chr05:32041345–32049554 (+) | 6.183e-11 | |
| Glyma.05G127800 | hypothetical protein | AT4G18240:SS4:starch synthase 4 | 1 | Chr05:32125404–32138244 (+) | 9.451e-11 | |
| Glyma.05G127900 | SAD1 | AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein | 1 | Chr05:32139620–32141770 (-) | 9.451e-11 | |
| Glyma.05G128200 | hypothetical protein | AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein | 1 | Chr05:32158034–32162343 (-) | 9.451e-11 | |
| Glyma.05G164700 | hypothetical protein | NA | 1 | Chr05:35543931–35549196 (-) | 7.225e-11 | |
| Glyma.05G224700 | hypothetical protein | NA | 1 | Chr05:40351005–40361888 (+) | 4.221e-11 | |
| Glyma.05G226000 | hypothetical protein | AT5G19730:AT5G19730:Pectin lyase-like superfamily protein | 1 | Chr05:40458098–40461736 (+) | 8.349e-11 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 1.027e-13 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 1.723e-17 | |
| Glyma.06G112300 | hypothetical protein | AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase | 1 | Chr06:9113982–9118848 (-) | 2.628e-12 | |
| Glyma.06G112600 | hypothetical protein | AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein | 1 | Chr06:9134358–9144986 (+) | 2.628e-12 | |
| Glyma.06G112700 | hypothetical protein | AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein | 1 | Chr06:9156973–9158659 (+) | 2.628e-12 | |
| Glyma.06G125200 | hypothetical protein | AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 | 1 | Chr06:10209787–10215982 (+) | 9.552e-11 | |
| Glyma.06G125300 | hypothetical protein | AT5G24105:AGP41:arabinogalactan protein 41 | 1 | Chr06:10216506–10218901 (-) | 9.552e-11 | |
| Glyma.06G126900 | hypothetical protein | AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) | 1 | Chr06:10403126–10408307 (-) | 3.856e-11 | |
| Glyma.06G292400 | hypothetical protein | AT4G28320:MAN5:Glycosyl hydrolase superfamily protein | 1 | Chr06:48130296–48134955 (+) | 8.972e-11 | |
| Glyma.07G017600 | hypothetical protein | NA | 1 | Chr07:1415837–1422680 (+) | 4.555e-12 | |
| Glyma.09G082000 | hypothetical protein | NA | 1 | Chr09:9638564–9650178 (+) | 9.285e-11 | |
| Glyma.10G081700 | hypothetical protein | NA | 1 | Chr10:9752508–9758422 (+) | 5.522e-11 | |
| Glyma.12G108600 | hypothetical protein | NA | 1 | Chr12:9994609–9997302 (-) | 7.757e-18 | |
| Glyma.12G109500 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:10308026–10314332 (-) | 7.757e-18 | |
| Glyma.12G109600 | hypothetical protein | AT4G03420:AT4G03420: | 1 | Chr12:10403574–10408026 (+) | 9.026e-12 | |
| Glyma.12G109700 | hypothetical protein | AT1G03620:AT1G03620:ELMO/CED-12 family protein | 1 | Chr12:10419034–10424716 (-) | 9.026e-12 | |
| Glyma.12G114500 | hypothetical protein | AT4G22930:PYR4:pyrimidin 4 | 1 | Chr12:11396572–11400825 (-) | 3.39e-13 | |
| Glyma.12G114900 | hypothetical protein | NA | 1 | Chr12:11457987–11462951 (-) | 3.39e-13 | |
| Glyma.12G198700 | hypothetical protein | AT5G62990:emb1692:Ubiquitin carboxyl-terminal hydrolase family protein | 1 | Chr12:36001658–36004086 (+) | 8.308e-12 | |
| Glyma.12G202200 | hypothetical protein | AT2G20860:LIP1:lipoic acid synthase 1 | 1 | Chr12:36267599–36271584 (+) | 1.298e-11 | |
| Glyma.12G202300 | hypothetical protein | NA | 1 | Chr12:36275438–36276838 (+) | 1.298e-11 | |
| Glyma.12G202400 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:36289704–36295084 (-) | 1.303e-11 | |
| Glyma.12G203600 | EXPB8 | AT2G20750:EXPB1:expansin B1 | 1 | Chr12:36390283–36394245 (-) | 3.575e-13 | |
| Glyma.12G204000 | hypothetical protein | AT1G03687:AT1G03687:DTW domain-containing protein | 1 | Chr12:36428558–36432835 (+) | 9.107e-14 | |
| Glyma.12G204600 | hypothetical protein | AT4G28310:AT4G28310:microtubule-associated protein | 1 | Chr12:36504234–36505245 (+) | 8.763e-12 | |
| Glyma.13G051000 | hypothetical protein | AT1G19920:APS2:Pseudouridine synthase/archaeosine transglycosylase-like family protein | 1 | Chr13:14742455–14747878 (-) | 8.952e-12 | |
| Glyma.13G203200 | hypothetical protein | AT3G52105:AT3G52105:DIS3-exonuclease-like protein | 1 | Chr13:31720004–31725252 (+) | 3.403e-11 | |
| Glyma.13G203300 | hypothetical protein | AT3G63530:BB:RING/U-box superfamily protein | 1 | Chr13:31727841–31735910 (-) | 3.403e-11 | |
| Glyma.13G203700 | hypothetical protein | NA | 1 | Chr13:31780982–31784218 (+) | 3.403e-11 | |
| Glyma.13G203900 | hypothetical protein | NA | 1 | Chr13:31793697–31796601 (-) | 1.653e-11 | |
| Glyma.14G071600 | hypothetical protein | AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein | 1 | Chr14:6016839–6019954 (+) | 1.919e-11 | |
| Glyma.14G094200 | hypothetical protein | AT5G11840:AT5G11840:YCF36, putative (DUF1230) | 1 | Chr14:8770378–8774149 (-) | 1.401e-11 | |
| Glyma.14G094300 | hypothetical protein | NA | 1 | Chr14:8771316–8772515 (+) | 1.401e-11 | |
| Glyma.14G148800 | hypothetical protein | AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein | 1 | Chr14:32154755–32157298 (+) | 7.533e-11 | |
| Glyma.14G190300 | hypothetical protein | AT2G04240:XERICO:RING/U-box superfamily protein | 1 | Chr14:45531920–45533895 (-) | 2.525e-11 | |
| Glyma.14G190400 | hypothetical protein | AT3G07650:COL9:CONSTANS-like 9 | 1 | Chr14:45536719–45544087 (-) | 2.525e-11 | |
| Glyma.15G124500 | MLO-like protein 13 | AT4G24250:MLO13:Seven transmembrane MLO family protein | 1 | Chr15:9888761–9894068 (-) | 7.744e-11 | |
| Glyma.16G041700 | hypothetical protein | AT1G64770:PnsB2:NDH-dependent cyclic electron flow 1 | 1 | Chr16:3909907–3912569 (+) | 4.642e-13 | |
| Glyma.16G117400 | hypothetical protein | NA | 1 | Chr16:26234552–26238233 (-) | 3.454e-11 | |
| Glyma.16G118400 | hypothetical protein | AT2G17190:AT2G17190:ubiquitin family protein | 1 | Chr16:26356863–26371741 (-) | 8.055e-11 | |
| Glyma.16G119300 | hypothetical protein | NA | 1 | Chr16:26643902–26644416 (+) | 2.219e-11 | |
| Glyma.16G119400 | hypothetical protein | NA | 1 | Chr16:26684278–26687087 (+) | 4.552e-12 | |
| Glyma.16G143400 | hypothetical protein | NA | 1 | Chr16:30337469–30338390 (-) | 3.034e-11 | |
| Glyma.16G209300 | hypothetical protein | NA | 1 | Chr16:36856833–36863994 (-) | 9.856e-12 | |
| Glyma.17G251200 | hypothetical protein | NA | 1 | Chr17:40605249–40607536 (+) | 2.837e-13 | |
| Glyma.17G258400 | hypothetical protein | AT1G30755:AT1G30755:elongation factor G, putative (DUF668) | 1 | Chr17:41248979–41254225 (+) | 6.739e-11 | |
| Glyma.17G258700 | hypothetical protein | AT4G24190:SHD:Chaperone protein htpG family protein | 1 | Chr17:41280124–41284980 (-) | 6.207e-11 | |
| Glyma.18G021700 | hypothetical protein | NA | 1 | Chr18:1590986–1596262 (-) | 6.791e-11 | |
| Glyma.19G006900 | hypothetical protein | AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein | 1 | Chr19:686556–692466 (-) | 2.694e-11 | |
| Glyma.19G009400 | hypothetical protein | AT5G40270:AT5G40270:HD domain-containing metal-dependent phosphohydrolase family protein | 1 | Chr19:885045–893253 (+) | 1.083e-11 | |
| Glyma.19G193500 | hypothetical protein | NA | 1 | Chr19:45118043–45121712 (-) | 1.583e-11 | |
| Glyma.20G019500 | hypothetical protein | AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme | 1 | Chr20:2039210–2040459 (+) | 9.809e-11 | |
| Glyma.20G019800 | hypothetical protein | AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein | 1 | Chr20:2051817–2057262 (+) | 1.478e-12 | |
| Glyma.20G022000 | hypothetical protein | NA | 1 | Chr20:2262949–2267229 (+) | 1.667e-11 | |
| Glyma.20G022500 | hypothetical protein | NA | 1 | Chr20:2342943–2353164 (+) | 1.134e-14 | |
| Glyma.20G106900 | hypothetical protein | NA | 1 | Chr20:34962043–34967985 (+) | 4.074e-11 | |
| Glyma.20G109800 | hypothetical protein | AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein | 1 | Chr20:35213258–35219502 (+) | 4.347e-11 |