Overview Annotation GWAS Evidence Associated genes

P24854

Metabolite ID
P24854
Deionized mass
288.1545 Da
Average m/z
289.1636
Average RT
14.5384
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
9
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

9 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.14G035600 hypothetical protein AT5G19380:CLT1:CRT (chloroquine-resistance transporter)-like transporter 1__AT5G12170:CLT3:CRT (chloroquine-resistance … 4Chr14:2660613–2665713 (+)2.13e-16
Glyma.14G035100 hypothetical protein NA 2Chr14:2610983–2616082 (+)2.612e-13
Glyma.14G035200 hypothetical protein AT5G19400:SMG7:Telomerase activating protein Est1 2Chr14:2619429–2623582 (-)2.63e-12
Glyma.14G035300 hypothetical protein AT5G01430:AT5G01430:Got1/Sft2-like vescicle transport protein family 2Chr14:2623312–2627371 (+)8.777e-13
Glyma.14G035400 hypothetical protein AT5G12150:AT5G12150:Rho GTPase activation protein (RhoGAP) with PH domain-containing protein__AT5G19390:AT5G19390:Rho G… 2Chr14:2628946–2641489 (-)8.777e-13
Glyma.14G032900 hypothetical protein AT4G23820:AT4G23820:Pectin lyase-like superfamily protein 1Chr14:2393952–2399559 (+)6.383e-13
Glyma.14G034100 hypothetical protein NA 1Chr14:2485439–2487656 (-)1.19e-17
Glyma.14G034200 hypothetical protein AT5G19420:AT5G19420:Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein_… 1Chr14:2493571–2501952 (-)1.2e-13
Glyma.14G035800 hypothetical protein AT5G12180:CPK17:calcium-dependent protein kinase 17__AT5G19360:CPK34:calcium-dependent protein kinase 34 1Chr14:2672381–2676894 (+)2.871e-11