Overview Annotation GWAS Evidence Associated genes

P24838

Metabolite ID
P24838
Deionized mass
592.3409 Da
Average m/z
593.3482
Average RT
14.5346
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
14
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

14 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G124800 hypothetical protein AT5G56460:AT5G56460:Protein kinase superfamily protein 4Chr08:9581305–9588064 (+)8.691e-12
Glyma.08G125100 hypothetical protein NA 2Chr08:9605622–9609101 (-)8.691e-12
Glyma.12G014700 hypothetical protein NA 2Chr12:1066217–1070263 (+)7.731e-11
Glyma.12G020400 hypothetical protein AT1G51500:ABCG12:ABC-2 type transporter family protein 2Chr12:1445666–1452363 (-)1.958e-28
Glyma.08G124500 hypothetical protein NA 1Chr08:9567013–9569478 (+)8.691e-12
Glyma.08G125000 hypothetical protein NA 1Chr08:9599620–9602873 (-)8.691e-12
Glyma.09G168700 hypothetical protein AT3G17690:CNGC19:cyclic nucleotide gated channel 19 1Chr09:39338715–39352099 (-)9.336e-11
Glyma.12G013900 hypothetical protein NA 1Chr12:1005754–1007345 (+)7.731e-11
Glyma.12G017900 hypothetical protein AT2G21045:AT2G21045:Rhodanese/Cell cycle control phosphatase superfamily protein 1Chr12:1249545–1251231 (+)8.177e-11
Glyma.14G043400 hypothetical protein AT3G11830:AT3G11830:TCP-1/cpn60 chaperonin family protein 1Chr14:3307730–3313769 (+)8.331e-11
Glyma.14G043800 hypothetical protein NA 1Chr14:3329698–3331556 (+)9.745e-11
Glyma.14G045100 hypothetical protein AT3G43600:AAO2:aldehyde oxidase 2__AT1G04580:AO4:aldehyde oxidase 4__AT5G20960:AO1:aldehyde oxidase 1__AT2G27150:AAO3:a… 1Chr14:3438828–3448015 (-)8.331e-11
Glyma.14G047400 WBb76L15.2 AT5G42370:AT5G42370:Calcineurin-like metallo-phosphoesterase superfamily protein 1Chr14:3607842–3612150 (-)4.514e-11
Glyma.20G127400 hypothetical protein NA 1Chr20:36939868–36948104 (+)5.056e-17