P24801
Metabolite ID
P24801
Deionized mass
108.0202 Da
Average m/z
109.0274
Average RT
14.5235
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
94
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
94 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.08G147300 | hypothetical protein | NA | 5 | Chr08:11238871–11242682 (+) | 2.146e-14 | |
| Glyma.19G027000 | hypothetical protein | NA | 4 | Chr19:3335896–3343744 (+) | 4.722e-11 | |
| Glyma.08G147500 | hypothetical protein | AT3G18680:AT3G18680:Amino acid kinase family protein | 3 | Chr08:11253074–11256505 (+) | 4.966e-13 | |
| Glyma.09G053800 | hypothetical protein | NA | 3 | Chr09:4737413–4755632 (-) | 4.844e-11 | |
| Glyma.13G134400 | hypothetical protein | AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein | 3 | Chr13:24677399–24693129 (-) | 6.865e-15 | |
| Glyma.20G107200 | hypothetical protein | AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein | 3 | Chr20:34984922–34988496 (+) | 1.352e-13 | |
| Glyma.08G142400 | WRKY6 | WRKY transcription factor 6 | NA | 2 | Chr08:10843433–10846761 (-) | 1.396e-11 |
| Glyma.08G144000 | hypothetical protein | NA | 2 | Chr08:10981530–10989743 (+) | 1.396e-11 | |
| Glyma.08G145600 | hypothetical protein | AT5G64740:CESA6:cellulose synthase 6__AT4G39350:CESA2:cellulose synthase A2__AT5G09870:CESA5:cellulose synthase 5 | 2 | Chr08:11066152–11073328 (-) | 4.852e-11 | |
| Glyma.09G018700 | hypothetical protein | NA | 2 | Chr09:1470411–1472672 (-) | 4.835e-12 | |
| Glyma.13G135700 | hypothetical protein | NA | 2 | Chr13:24812720–24818735 (+) | 4.551e-13 | |
| Glyma.13G135800 | hypothetical protein | AT5G02800:CDL1:Protein kinase superfamily protein | 2 | Chr13:24820151–24823999 (-) | 4.551e-13 | |
| Glyma.19G026600 | hypothetical protein | AT4G13700:PAP23:purple acid phosphatase 23 | 2 | Chr19:3303658–3312907 (-) | 4.722e-11 | |
| Glyma.01G175500 | hypothetical protein | AT3G50660:DWF4:Cytochrome P450 superfamily protein | 1 | Chr01:51219681–51224948 (+) | 7.297e-11 | |
| Glyma.02G129200 | hypothetical protein | AT1G26160:AT1G26160:Metal-dependent phosphohydrolase | 1 | Chr02:13217893–13226292 (+) | 5.234e-12 | |
| Glyma.02G130200 | hypothetical protein | AT1G68740:PHO1;H1:EXS (ERD1/XPR1/SYG1) family protein | 1 | Chr02:13340016–13346701 (-) | 5.234e-12 | |
| Glyma.02G130700 | hypothetical protein | AT1G68750:PPC4:phosphoenolpyruvate carboxylase 4 | 1 | Chr02:13470428–13489647 (-) | 5.234e-12 | |
| Glyma.02G131600 | hypothetical protein | AT4G34020:DJ1C:Class I glutamine amidotransferase-like superfamily protein | 1 | Chr02:13577916–13581914 (+) | 5.234e-12 | |
| Glyma.02G151500 | hypothetical protein | AT2G47990:SWA1:transducin family protein / WD-40 repeat family protein | 1 | Chr02:15586732–15588774 (+) | 3.349e-12 | |
| Glyma.02G176800 | hypothetical protein | AT5G06839:TGA10:bZIP transcription factor family protein | 1 | Chr02:29019977–29028838 (-) | 3.071e-11 | |
| Glyma.02G203800 | hypothetical protein | AT4G30935:WRKY32:WRKY DNA-binding protein 32 | 1 | Chr02:38920714–38930381 (+) | 9.547e-11 | |
| Glyma.02G205400 | hypothetical protein | AT5G57880:MPS1:multipolar spindle 1 | 1 | Chr02:39040135–39043181 (-) | 1.154e-11 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 3.733e-12 | |
| Glyma.03G040600 | hypothetical protein | AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 | 1 | Chr03:5113019–5121557 (+) | 5.461e-11 | |
| Glyma.03G209700 | hypothetical protein | NA | 1 | Chr03:41646792–41648527 (+) | 7.915e-12 | |
| Glyma.03G242800 | hypothetical protein | AT4G08630:AT4G08630:fas-binding factor-like protein | 1 | Chr03:44064511–44073939 (+) | 8.756e-12 | |
| Glyma.05G124700 | hypothetical protein | NA | 1 | Chr05:31807311–31817648 (+) | 1.952e-11 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 5.728e-14 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 3.068e-15 | |
| Glyma.05G237800 | hypothetical protein | AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 | 1 | Chr05:41406807–41413022 (-) | 1.447e-12 | |
| Glyma.06G112300 | hypothetical protein | AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase | 1 | Chr06:9113982–9118848 (-) | 1.314e-11 | |
| Glyma.06G112600 | hypothetical protein | AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein | 1 | Chr06:9134358–9144986 (+) | 1.314e-11 | |
| Glyma.06G112700 | hypothetical protein | AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein | 1 | Chr06:9156973–9158659 (+) | 1.314e-11 | |
| Glyma.06G125200 | hypothetical protein | AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 | 1 | Chr06:10209787–10215982 (+) | 1.339e-11 | |
| Glyma.06G125300 | hypothetical protein | AT5G24105:AGP41:arabinogalactan protein 41 | 1 | Chr06:10216506–10218901 (-) | 1.339e-11 | |
| Glyma.06G126500 | hypothetical protein | AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein | 1 | Chr06:10367536–10373426 (-) | 2.484e-11 | |
| Glyma.08G104600 | hypothetical protein | AT1G27930:AT1G27930:glucuronoxylan 4-O-methyltransferase-like protein (DUF579) | 1 | Chr08:8045602–8047222 (-) | 6.964e-12 | |
| Glyma.08G111700 | hypothetical protein | NA | 1 | Chr08:8604527–8606424 (-) | 1.035e-11 | |
| Glyma.08G117500 | hypothetical protein | AT4G18780:IRX1:cellulose synthase family protein | 1 | Chr08:9065033–9071774 (-) | 3.476e-11 | |
| Glyma.08G118400 | hypothetical protein | AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein | 1 | Chr08:9147404–9153858 (-) | 3.476e-11 | |
| Glyma.08G141800 | hypothetical protein | AT1G74050:AT1G74050:Ribosomal protein L6 family protein | 1 | Chr08:10823835–10825767 (+) | 5.57e-11 | |
| Glyma.08G143000 | hypothetical protein | AT3G57940:AT3G57940:GNAT acetyltransferase (DUF699)__AT1G10490:AT1G10490:GNAT acetyltransferase (DUF699) | 1 | Chr08:10872816–10885213 (-) | 1.396e-11 | |
| Glyma.08G143200 | hypothetical protein | AT4G39420:AT4G39420:spatacsin carboxy-terminus protein | 1 | Chr08:10898111–10922975 (-) | 1.396e-11 | |
| Glyma.08G144600 | hypothetical protein | NA | 1 | Chr08:10997491–11002758 (+) | 1.396e-11 | |
| Glyma.08G144700 | hypothetical protein | NA | 1 | Chr08:11004138–11009322 (-) | 1.396e-11 | |
| Glyma.08G144900 | hypothetical protein | NA | 1 | Chr08:11022996–11023930 (-) | 5.57e-11 | |
| Glyma.08G145300 | hypothetical protein | AT5G64750:ABR1:Integrase-type DNA-binding superfamily protein | 1 | Chr08:11041449–11043230 (-) | 5.57e-11 | |
| Glyma.08G145400 | hypothetical protein | AT5G09880:AT5G09880:Splicing factor, CC1-like protein | 1 | Chr08:11050835–11058461 (+) | 5.57e-11 | |
| Glyma.08G145500 | hypothetical protein | NA | 1 | Chr08:11061447–11062601 (-) | 5.57e-11 | |
| Glyma.08G145700 | hypothetical protein | AT5G64730:AT5G64730:Transducin/WD40 repeat-like superfamily protein | 1 | Chr08:11083230–11086950 (-) | 9.84e-11 | |
| Glyma.08G145900 | hypothetical protein | AT4G39330:CAD9:cinnamyl alcohol dehydrogenase 9 | 1 | Chr08:11092669–11096142 (-) | 9.84e-11 | |
| Glyma.08G146100 | hypothetical protein | NA | 1 | Chr08:11119305–11124078 (+) | 3.184e-12 | |
| Glyma.08G147200 | hypothetical protein | AT3G18710:PUB29:plant U-box 29__AT5G64660:CMPG2:CYS, MET, PRO, and GLY protein 2 | 1 | Chr08:11225587–11227445 (+) | 2.886e-15 | |
| Glyma.08G147400 | hypothetical protein | AT1G48870:AT1G48870:Transducin/WD40 repeat-like superfamily protein | 1 | Chr08:11248804–11251957 (+) | 4.296e-14 | |
| Glyma.08G204800 | hypothetical protein | AT3G16140:PSAH-1:photosystem I subunit H-1 | 1 | Chr08:16601039–16602646 (+) | 6.031e-11 | |
| Glyma.08G330400 | hypothetical protein | NA | 1 | Chr08:44820327–44823668 (+) | 1.37e-11 | |
| Glyma.08G330500 | hypothetical protein | AT3G07680:p24beta2:emp24/gp25L/p24 family/GOLD family protein | 1 | Chr08:44824324–44827127 (-) | 1.37e-11 | |
| Glyma.09G019400 | hypothetical protein | AT1G55270:AT1G55270:Galactose oxidase/kelch repeat superfamily protein | 1 | Chr09:1518046–1520807 (+) | 1.064e-11 | |
| Glyma.09G019800 | VAMP721D | vesicle-associated membrane protein 721d | NA | 1 | Chr09:1540660–1547761 (+) | 2.09e-12 |
| Glyma.09G060200 | hypothetical protein | AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 1 | Chr09:5571201–5579976 (-) | 1.118e-12 | |
| Glyma.09G060300 | hypothetical protein | AT5G57140:PAP28:purple acid phosphatase 28 | 1 | Chr09:5609003–5612943 (+) | 5.019e-13 | |
| Glyma.09G062900 | hypothetical protein | NA | 1 | Chr09:6004419–6011041 (+) | 5.826e-12 | |
| Glyma.09G082000 | hypothetical protein | NA | 1 | Chr09:9638564–9650178 (+) | 1.326e-13 | |
| Glyma.09G084300 | hypothetical protein | AT2G34680:AIR9:Outer arm dynein light chain 1 protein | 1 | Chr09:10129602–10197250 (-) | 4.51e-12 | |
| Glyma.10G082100 | hypothetical protein | AT3G05680:EMB2016:embryo defective 2016 | 1 | Chr10:9934486–9960586 (-) | 6.264e-11 | |
| Glyma.12G108600 | hypothetical protein | NA | 1 | Chr12:9994609–9997302 (-) | 8.07e-11 | |
| Glyma.12G109500 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:10308026–10314332 (-) | 8.07e-11 | |
| Glyma.12G205900 | hypothetical protein | NA | 1 | Chr12:36622011–36625824 (+) | 5.077e-11 | |
| Glyma.13G134300 | hypothetical protein | NA | 1 | Chr13:24664171–24665742 (-) | 6.865e-15 | |
| Glyma.13G134500 | hypothetical protein | AT3G09560:PAH1:Lipin family protein | 1 | Chr13:24696109–24705068 (-) | 5.078e-14 | |
| Glyma.13G135300 | hypothetical protein | NA | 1 | Chr13:24770681–24773826 (+) | 5.348e-12 | |
| Glyma.13G135400 | hypothetical protein | AT5G12130:PDE149:integral membrane TerC family protein | 1 | Chr13:24786242–24791938 (+) | 5.348e-12 | |
| Glyma.13G135500 | hypothetical protein | AT5G02780:GSTL1:glutathione transferase lambda 1 | 1 | Chr13:24798567–24801567 (+) | 4.551e-13 | |
| Glyma.13G156000 | hypothetical protein | AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 | 1 | Chr13:27104338–27109785 (+) | 1.822e-12 | |
| Glyma.13G204200 | hypothetical protein | NA | 1 | Chr13:31822330–31826011 (+) | 2.084e-11 | |
| Glyma.14G068500 | hypothetical protein | NA | 1 | Chr14:5741909–5745574 (-) | 3.363e-11 | |
| Glyma.14G069500 | hypothetical protein | AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 | 1 | Chr14:5822246–5825628 (-) | 8.858e-11 | |
| Glyma.14G071700 | hypothetical protein | AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 | 1 | Chr14:6037810–6041899 (+) | 1.84e-11 | |
| Glyma.14G071800 | hypothetical protein | NA | 1 | Chr14:6040746–6041899 (-) | 1.84e-11 | |
| Glyma.15G121100 | hypothetical protein | NA | 1 | Chr15:9567797–9570248 (+) | 3.136e-13 | |
| Glyma.15G121300 | hypothetical protein | AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 | 1 | Chr15:9584685–9590201 (-) | 5.683e-13 | |
| Glyma.15G121500 | hypothetical protein | AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein | 1 | Chr15:9602794–9615281 (+) | 3.136e-13 | |
| Glyma.15G121800 | hypothetical protein | NA | 1 | Chr15:9643746–9648073 (+) | 3.136e-13 | |
| Glyma.15G256300 | hypothetical protein | NA | 1 | Chr15:48546007–48547401 (-) | 4.072e-13 | |
| Glyma.16G119400 | hypothetical protein | NA | 1 | Chr16:26684278–26687087 (+) | 9.245e-11 | |
| Glyma.16G121000 | IQD20 | AT3G51380:IQD20:IQ-domain 20 | 1 | Chr16:26909514–26910355 (+) | 6.652e-12 | |
| Glyma.16G179800 | hypothetical protein | AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein | 1 | Chr16:34022480–34027055 (-) | 6.182e-11 | |
| Glyma.17G064000 | hypothetical protein | AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein | 1 | Chr17:4924830–4930155 (-) | 3.207e-12 | |
| Glyma.17G064200 | hypothetical protein | AT5G57500:AT5G57500:Galactosyltransferase family protein | 1 | Chr17:4943412–4944357 (-) | 3.207e-12 | |
| Glyma.18G227400 | hypothetical protein | AT2G45720:AT2G45720:ARM repeat superfamily protein | 1 | Chr18:51650951–51654636 (-) | 9.39e-12 | |
| Glyma.18G230700 | hypothetical protein | AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) | 1 | Chr18:51943730–51947645 (+) | 4.245e-11 | |
| Glyma.18G299100 | hypothetical protein | AT5G13420:TRA2:Aldolase-type TIM barrel family protein | 1 | Chr18:57674222–57678396 (+) | 4.384e-11 | |
| Glyma.20G106900 | hypothetical protein | NA | 1 | Chr20:34962043–34967985 (+) | 4.891e-12 | |
| Glyma.20G120200 | hypothetical protein | NA | 1 | Chr20:36268998–36282456 (-) | 6.659e-11 |