Overview Annotation GWAS Evidence Associated genes

P24788

Metabolite ID
P24788
Deionized mass
277.1637 Da
Average m/z
278.1726
Average RT
14.5208
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
28
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

28 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)2.979e-11
Glyma.01G021000 hypothetical protein NA 1Chr01:2122589–2125447 (+)1.666e-12
Glyma.01G021600 hypothetical protein AT5G65540:AT5G65540:transcription initiation factor TFIID subunit 1Chr01:2189923–2194362 (-)1.095e-12
Glyma.01G021700 hypothetical protein NA 1Chr01:2197811–2200232 (+)1.66e-12
Glyma.01G022000 hypothetical protein NA 1Chr01:2209688–2210849 (-)1.66e-12
Glyma.01G022200 hypothetical protein NA 1Chr01:2212834–2213622 (+)1.66e-12
Glyma.03G019700 hypothetical protein AT3G61130:GAUT1:galacturonosyltransferase 1 1Chr03:2010835–2018418 (+)4.475e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.336e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.7e-14
Glyma.09G202900 hypothetical protein AT5G10560:AT5G10560:Glycosyl hydrolase family protein 1Chr09:42685911–42690981 (-)1.78e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.448e-12
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)5.578e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.614e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)1.614e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)4.927e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)4.927e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)4.927e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.343e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)2.979e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.86e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)6.868e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.86e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.86e-12
Glyma.16G105700 hypothetical protein NA 1Chr16:21404554–21412265 (-)4.397e-11
Glyma.16G105800 hypothetical protein NA 1Chr16:21409016–21412087 (-)4.397e-11
Glyma.16G106200 hypothetical protein NA 1Chr16:21463300–21469532 (+)4.397e-11
Glyma.16G146700 hypothetical protein NA 1Chr16:30755899–30759360 (-)4.756e-11
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)3.907e-11