Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P24780

Metabolite ID
P24780
Deionized mass
793.3393 Da
Average m/z
794.3530
Average RT
14.5189
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
26
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

26 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)4.698e-11
Glyma.16G209300 hypothetical protein NA 2Chr16:36856833–36863994 (-)2.085e-11
Glyma.17G208400 hypothetical protein NA 2Chr17:34184145–34222159 (-)2.099e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.218e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.525e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)2.478e-14
Glyma.08G137600 hypothetical protein AT4G39780:AT4G39780:Integrase-type DNA-binding superfamily protein 1Chr08:10551821–10553620 (-)5.817e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)6.567e-13
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)6.567e-13
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)6.567e-13
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)4.698e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)6.05e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)6.05e-11
Glyma.17G205900 hypothetical protein NA 1Chr17:33578345–33582235 (-)1.028e-11
Glyma.17G206000 hypothetical protein NA 1Chr17:33582328–33583013 (-)1.028e-11
Glyma.17G206100 hypothetical protein NA 1Chr17:33612472–33622199 (-)1.028e-11
Glyma.17G207000 hypothetical protein NA 1Chr17:33925621–33935113 (+)2.099e-12
Glyma.17G208500 hypothetical protein NA 1Chr17:34224093–34230310 (-)2.099e-12
Glyma.17G209600 hypothetical protein AT2G25530:AT2G25530:AFG1-like ATPase family protein 1Chr17:34571688–34581787 (-)2.099e-12
Glyma.17G209700 hypothetical protein NA 1Chr17:34586468–34590309 (+)2.099e-12
Glyma.17G211500 hypothetical protein AT4G32272:AT4G32272:Nucleotide/sugar transporter family protein 1Chr17:34916813–34922875 (+)8.224e-12
Glyma.17G211600 hypothetical protein NA 1Chr17:34925097–34929797 (+)2.35e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.692e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.692e-11
Glyma.19G196700 hypothetical protein NA 1Chr19:45383611–45390744 (-)3.587e-11
Glyma.19G198300 hypothetical protein NA 1Chr19:45545787–45549226 (+)6.052e-11