Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P24737

Metabolite ID
P24737
Deionized mass
307.1694 Da
Average m/z
308.1727
Average RT
14.5106
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
25
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

25 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.17G215200 hypothetical protein NA 2Chr17:36125880–36142936 (+)5.724e-11
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 1Chr03:2007617–2009871 (+)1.361e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)4.077e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.332e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.332e-12
Glyma.13G048100 hypothetical protein AT1G14130:AT1G14130:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 1Chr13:14407335–14413574 (+)8.408e-12
Glyma.13G048600 hypothetical protein AT5G15870:AT5G15870:glycosyl hydrolase family 81 protein 1Chr13:14456516–14458768 (-)3.206e-11
Glyma.13G049100 hypothetical protein NA 1Chr13:14498952–14506408 (-)2.187e-11
Glyma.13G049400 hypothetical protein AT2G20000:HBT:CDC27 family protein 1Chr13:14530308–14541307 (-)2.187e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)9.879e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)4.585e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.891e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)4.585e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)4.585e-12
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)6.601e-11
Glyma.17G189300 hypothetical protein NA 1Chr17:25644440–25649489 (-)5.905e-13
Glyma.17G212100 hypothetical protein NA 1Chr17:35010757–35014587 (+)5.724e-11
Glyma.17G212300 hypothetical protein AT5G25310:AT5G25310:Exostosin family protein 1Chr17:35122156–35129564 (-)5.724e-11
Glyma.17G213300 hypothetical protein NA 1Chr17:35589559–35592664 (+)5.724e-11
Glyma.17G213600 hypothetical protein AT4G32060:AT4G32060:calcium-binding EF hand family protein 1Chr17:35740625–35746554 (-)5.724e-11
Glyma.17G213700 hypothetical protein AT5G11090:AT5G11090:serine-rich protein-like protein 1Chr17:35767502–35768989 (-)5.724e-11
Glyma.17G215300 hypothetical protein AT5G25265:AT5G25265:Hyp O-arabinosyltransferase-like protein 1Chr17:36142245–36146771 (-)5.723e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)5.724e-11
Glyma.20G144800 hypothetical protein NA 1Chr20:38334461–38336510 (-)8.655e-11
Glyma.20G145300 hypothetical protein NA 1Chr20:38383061–38386845 (+)8.655e-11