Overview Annotation GWAS Evidence Associated genes

P24640

Metabolite ID
P24640
Deionized mass
756.1826 Da
Average m/z
757.1962
Average RT
14.4809
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
26
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

26 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)4.209e-11
Glyma.19G033700 hypothetical protein AT3G02320:AT3G02320:N2,N2-dimethylguanosine tRNA methyltransferase__AT5G15810:AT5G15810:tRNA (guanine(26)-N(2))-dimethy… 2Chr19:4332261–4339570 (+)1.74e-11
Glyma.20G120200 hypothetical protein NA 2Chr20:36268998–36282456 (-)4.102e-12
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)3.011e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)8.609e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)6.981e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)7.049e-12
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)5.153e-12
Glyma.09G276300 WNK10 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr09:49161113–49166087 (+)4.366e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)1.761e-11
Glyma.13G204700 hypothetical protein AT1G11720:SS3:starch synthase 3 1Chr13:31872482–31883107 (-)7.682e-13
Glyma.13G204800 hypothetical protein AT4G04640:ATPC1:ATPase, F1 complex, gamma subunit protein 1Chr13:31885462–31887911 (-)7.682e-13
Glyma.13G204900 hypothetical protein AT1G64570:DUO3:Homeodomain-like superfamily protein 1Chr13:31888324–31898942 (-)7.682e-13
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)3.054e-11
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)1.299e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.374e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)4.209e-11
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)4.209e-11
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)4.209e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.434e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)5.673e-12
Glyma.18G184200 hypothetical protein NA 1Chr18:44364673–44366631 (-)3.54e-12
Glyma.19G031200 hypothetical protein NA 1Chr19:3870532–3874170 (-)1.505e-13
Glyma.19G032800 hypothetical protein NA 1Chr19:4196959–4199265 (-)1.631e-15
Glyma.19G033800 hypothetical protein AT3G02230:RGP1:reversibly glycosylated polypeptide 1 1Chr19:4352324–4355794 (-)1.74e-11
Glyma.20G002800 hypothetical protein NA 1Chr20:259703–260884 (+)6.322e-13