Overview Annotation GWAS Evidence Associated genes

P24633

Metabolite ID
P24633
Deionized mass
432.1109 Da
Average m/z
433.1138
Average RT
14.4773
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
13
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

13 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G117000 hypothetical protein NA 1Chr01:40366281–40370122 (+)1.827e-12
Glyma.01G117200 hypothetical protein NA 1Chr01:40497525–40501709 (-)1.827e-12
Glyma.01G168800 hypothetical protein AT1G24430:AT1G24430:HXXXD-type acyl-transferase family protein 1Chr01:50633986–50636589 (+)5.3e-12
Glyma.02G193800 hypothetical protein AT5G06470:AT5G06470:Glutaredoxin family protein 1Chr02:36706657–36712744 (-)3.487e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.087e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)3.896e-12
Glyma.08G115700 hypothetical protein AT1G29120:AT1G29120:Hydrolase-like protein family 1Chr08:8868075–8876513 (+)7.716e-11
Glyma.08G127000 hypothetical protein NA 1Chr08:9781692–9785219 (+)4.942e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)4.403e-12
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)5.076e-12
Glyma.13G204200 hypothetical protein NA 1Chr13:31822330–31826011 (+)4.317e-12
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)1.627e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)2.389e-11