Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P24627

Metabolite ID
P24627
Deionized mass
432.1017 Da
Average m/z
433.1112
Average RT
14.4747
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
24
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

24 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G120100 hypothetical protein AT5G26120:ASD2:alpha-L-arabinofuranosidase 2 2Chr03:33174618–33180955 (+)4.184e-12
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 2Chr04:7187985–7192897 (+)4.938e-12
Glyma.06G130300 hypothetical protein AT5G53080:AT5G53080:Tetratricopeptide repeat (TPR)-like superfamily protein 2Chr06:10709045–10716245 (-)2.673e-11
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 2Chr09:5571201–5579976 (-)7.066e-14
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)1.236e-11
Glyma.06G129800 hypothetical protein AT5G53030:AT5G53030:uncharacterized protein 1Chr06:10667029–10669377 (+)4.492e-11
Glyma.06G130100 hypothetical protein AT3G49290:ABIL2:ABL interactor-like protein 2 1Chr06:10695256–10699675 (+)4.492e-11
Glyma.06G132800 hypothetical protein AT4G27680:AT4G27680:P-loop containing nucleoside triphosphate hydrolases superfamily protein__AT5G53540:AT5G53540:P-loo… 1Chr06:10938746–10944330 (-)2.292e-13
Glyma.06G133000 hypothetical protein NA 1Chr06:10954830–10958961 (+)2.292e-13
Glyma.06G133400 hypothetical protein AT5G53570:AT5G53570:Ypt/Rab-GAP domain of gyp1p superfamily protein 1Chr06:10976199–10981248 (-)2.292e-13
Glyma.06G133600 hypothetical protein NA 1Chr06:10992766–10995481 (+)2.292e-13
Glyma.06G133800 hypothetical protein NA 1Chr06:11001171–11002938 (-)2.292e-13
Glyma.06G134300 hypothetical protein AT5G53620:AT5G53620:RNA polymerase II degradation factor 1Chr06:11035872–11043485 (+)9.557e-11
Glyma.06G134900 hypothetical protein AT4G27670:HSP21:heat shock protein 21 1Chr06:11083841–11088991 (+)1.611e-12
Glyma.06G135100 hypothetical protein NA 1Chr06:11096995–11099852 (+)2.719e-12
Glyma.06G135300 hypothetical protein NA 1Chr06:11125203–11130757 (-)3.93e-12
Glyma.06G135400 hypothetical protein NA 1Chr06:11125473–11126625 (+)3.93e-12
Glyma.09G059600 hypothetical protein AT4G30010:AT4G30010:ATP-dependent RNA helicase 1Chr09:5504630–5507434 (+)7.811e-11
Glyma.09G059700 hypothetical protein AT4G29940:PRHA:pathosis related homeodomain protein A 1Chr09:5513108–5520158 (+)7.811e-11
Glyma.09G069400 hypothetical protein NA 1Chr09:7055066–7058933 (+)1.257e-11
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)4.184e-11
Glyma.16G069300 hypothetical protein AT3G01600:NAC044:NAC domain containing protein 44 1Chr16:6914905–6920531 (+)9.149e-11
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)7.272e-12
Glyma.19G150000 hypothetical protein AT3G58060:AT3G58060:Cation efflux family protein 1Chr19:41018746–41025024 (+)4.485e-11