Overview Annotation GWAS Evidence Associated genes

P24590

Metabolite ID
P24590
Deionized mass
330.1252 Da
Average m/z
331.1349
Average RT
14.4636
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
17
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

17 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.09G053800 hypothetical protein NA 3Chr09:4737413–4755632 (-)3.077e-11
Glyma.01G166900 hypothetical protein NA 1Chr01:50481701–50482857 (-)6.843e-12
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)1.554e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)9.05e-12
Glyma.05G147900 hypothetical protein AT1G27340:LCR:Galactose oxidase/kelch repeat superfamily protein 1Chr05:34213379–34217429 (+)2.48e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)6.741e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)3.37e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)9.802e-11
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)9.802e-11
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)9.802e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)2.302e-11
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)8.692e-11
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)8.692e-11
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)5.086e-13
Glyma.16G189000 hypothetical protein NA 1Chr16:35160485–35167548 (-)1.592e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)1.925e-12
Glyma.16G189200 hypothetical protein AT3G48970:AT3G48970:Heavy metal transport/detoxification superfamily protein 1Chr16:35177846–35179798 (+)1.395e-12