Overview Annotation GWAS Evidence Associated genes

P24558

Metabolite ID
P24558
Deionized mass
196.1087 Da
Average m/z
197.1157
Average RT
14.4537
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
8
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

8 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G340800 hypothetical protein NA 3Chr08:45686653–45690832 (+)3.401e-14
Glyma.02G226800 hypothetical protein NA 1Chr02:41369419–41374792 (+)1.33e-15
Glyma.08G341200 hypothetical protein NA 1Chr08:45718242–45721977 (-)3.401e-14
Glyma.08G341400 hypothetical protein NA 1Chr08:45728546–45729738 (+)3.401e-14
Glyma.08G341500 Ti-a NA 1Chr08:45733267–45736194 (+)3.401e-14
Glyma.08G342200 hypothetical protein NA 1Chr08:45779165–45780298 (+)3.401e-14
Glyma.12G029500 hypothetical protein AT1G10870:AGD4:ARF-GAP domain 4 1Chr12:2192414–2205662 (+)3.726e-11
Glyma.20G236900 hypothetical protein AT3G05550:AT3G05550:Hypoxia-responsive family protein__AT5G27760:AT5G27760:Hypoxia-responsive family protein 1Chr20:46905295–46907950 (+)8.192e-11