Overview Annotation GWAS Evidence Associated genes

P24503

Metabolite ID
P24503
Deionized mass
500.1510 Da
Average m/z
501.1577
Average RT
14.4335
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
22
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

22 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G166400 hypothetical protein AT4G36080:AT4G36080:phosphotransferases/inositol or phosphatidylinositol kinase 2Chr01:50404781–50436297 (-)3.978e-11
Glyma.02G109400 hypothetical protein NA 1Chr02:10495046–10497626 (-)2.155e-11
Glyma.02G109700 hypothetical protein NA 1Chr02:10518501–10523556 (+)8.946e-11
Glyma.02G109900 hypothetical protein AT2G03150:emb1579:ATP/GTP-binding protein family 1Chr02:10547851–10557930 (+)2.155e-11
Glyma.02G111800 hypothetical protein AT1G69420:AT1G69420:DHHC-type zinc finger family protein 1Chr02:10808123–10814611 (-)1.927e-11
Glyma.02G112500 hypothetical protein AT1G69400:AT1G69400:Transducin/WD40 repeat-like superfamily protein 1Chr02:10910270–10917963 (-)2.007e-12
Glyma.02G112900 hypothetical protein AT2G03350:AT2G03350:DUF538 family protein (Protein of unknown function, DUF538) 1Chr02:10933057–10936021 (-)2.007e-12
Glyma.02G113000 hypothetical protein AT1G69370:CM3:chorismate mutase 3 1Chr02:10939096–10941983 (-)8.051e-13
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)5.864e-11
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)5.864e-11
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)5.864e-11
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)7.938e-11
Glyma.08G039600 hypothetical protein NA 1Chr08:3107698–3116601 (-)5.957e-11
Glyma.09G057000 hypothetical protein NA 1Chr09:5140625–5145658 (+)2.341e-11
Glyma.09G057300 hypothetical protein AT5G57330:AT5G57330:Galactose mutarotase-like superfamily protein 1Chr09:5164998–5171598 (-)8.175e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)7.048e-12
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)7.048e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)7.048e-12
Glyma.14G201800 hypothetical protein AT5G58390:AT5G58390:Peroxidase superfamily protein 1Chr14:46728613–46733836 (+)2.486e-14
Glyma.16G066000 hypothetical protein AT5G40660:AT5G40660:ATP12 protein-like protein 1Chr16:6570689–6574950 (+)1.289e-13
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)7.696e-15
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)3.705e-11