Overview Annotation GWAS Evidence Associated genes

P24489

Metabolite ID
P24489
Deionized mass
609.2548 Da
Average m/z
610.2667
Average RT
14.4292
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
8
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

8 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)3.399e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)1.591e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)7.606e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)3.399e-11
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)2.823e-11
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr16:1877938–1879947 (-)2.038e-11
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)8.784e-14
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)8.784e-14