Overview Annotation GWAS Evidence Associated genes

P24386

Metabolite ID
P24386
Deionized mass
620.2272 Da
Average m/z
621.2349
Average RT
14.4014
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
7
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

7 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.14G032900 hypothetical protein AT4G23820:AT4G23820:Pectin lyase-like superfamily protein 3Chr14:2393952–2399559 (+)2.11e-13
Glyma.14G034200 hypothetical protein AT5G19420:AT5G19420:Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein_… 2Chr14:2493571–2501952 (-)1.182e-13
Glyma.14G035600 hypothetical protein AT5G19380:CLT1:CRT (chloroquine-resistance transporter)-like transporter 1__AT5G12170:CLT3:CRT (chloroquine-resistance … 2Chr14:2660613–2665713 (+)6.067e-14
Glyma.14G033200 hypothetical protein NA 1Chr14:2405393–2413069 (+)2.53e-11
Glyma.14G033400 hypothetical protein AT3G22330:PMH2:putative mitochondrial RNA helicase 2 1Chr14:2422873–2427873 (-)2.53e-11
Glyma.14G033600 hypothetical protein AT2G13370:CHR5:chromatin remodeling 5 1Chr14:2445694–2466124 (+)2.53e-11
Glyma.14G034000 hypothetical protein NA 1Chr14:2482399–2484675 (-)1.148e-12