Overview Annotation GWAS Evidence Associated genes

P24348

Metabolite ID
P24348
Deionized mass
250.1199 Da
Average m/z
251.1256
Average RT
14.3935
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
7
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

7 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1134716–1143232 (+)4.659e-12
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 2Chr19:1148510–1149495 (+)7.584e-12
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)7.631e-12
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)1.956e-11
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)1.165e-13
Glyma.12G007800 hypothetical protein NA 1Chr12:572469–583974 (+)6.2e-13
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)6.323e-11