Overview Annotation GWAS Evidence Associated genes

P24325

Metabolite ID
P24325
Deionized mass
163.1063 Da
Average m/z
164.1126
Average RT
14.3850
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
51
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

51 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)3.376e-11
Glyma.07G021700 hypothetical protein NA 2Chr07:1684537–1692320 (+)2.801e-16
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)5.922e-16
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 2Chr12:36267599–36271584 (+)2.926e-13
Glyma.13G051000 hypothetical protein AT1G19920:APS2:Pseudouridine synthase/archaeosine transglycosylase-like family protein 2Chr13:14742455–14747878 (-)2.128e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)2.995e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)2.996e-11
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)4.732e-11
Glyma.05G130700 hypothetical protein AT2G34560:CCP1:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr05:32376592–32384905 (+)2.407e-11
Glyma.05G210400 hypothetical protein AT5G41460:AT5G41460:transferring glycosyl group transferase (DUF604)__AT4G11350:AT4G11350:transferring glycosyl group t… 1Chr05:39235808–39239820 (-)5.647e-13
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)3.607e-15
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)3.607e-15
Glyma.07G095400 hypothetical protein NA 1Chr07:8914725–8920132 (+)9.128e-13
Glyma.09G011700 hypothetical protein NA 1Chr09:894858–897607 (-)4.106e-15
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)1.147e-14
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)2.86e-14
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 1Chr09:41147591–41150204 (+)5.885e-11
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)9.608e-11
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)4.785e-11
Glyma.09G280300 hypothetical protein AT2G38480:AT2G38480:Uncharacterized protein family (UPF0497) 1Chr09:49547489–49550731 (-)7.472e-11
Glyma.09G281400 hypothetical protein AT3G18620:AT3G18620:DHHC-type zinc finger family protein 1Chr09:49668985–49676216 (-)9.842e-11
Glyma.09G281700 hypothetical protein NA 1Chr09:49705303–49733182 (-)9.842e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)6.397e-12
Glyma.10G039700 hypothetical protein NA 1Chr10:3509365–3515838 (-)2.451e-11
Glyma.11G110100 hypothetical protein AT2G16510:AT2G16510:ATPase, F0/V0 complex, subunit C protein 1Chr11:8397135–8398949 (-)6.963e-11
Glyma.11G110300 hypothetical protein AT2G16530:AT2G16530:3-oxo-5-alpha-steroid 4-dehydrogenase family protein__AT1G72590:AT1G72590:3-oxo-5-alpha-steroid 4-d… 1Chr11:8402144–8406496 (-)3.189e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.926e-13
Glyma.13G049100 hypothetical protein NA 1Chr13:14498952–14506408 (-)5.017e-12
Glyma.13G049200 hypothetical protein AT3G02440:TBL20:TRICHOME BIREFRINGENCE-LIKE 20 1Chr13:14515169–14519326 (-)7.229e-11
Glyma.13G049400 hypothetical protein AT2G20000:HBT:CDC27 family protein 1Chr13:14530308–14541307 (-)7.229e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)2.721e-12
Glyma.15G036000 hypothetical protein NA 1Chr15:2855429–2860689 (+)7.082e-13
Glyma.15G037200 hypothetical protein AT1G07530:SCL14:SCARECROW-like 14 1Chr15:2933806–2936195 (-)1.38e-12
Glyma.15G037300 hypothetical protein AT5G59430:TRP1:telomeric repeat binding protein 1 1Chr15:2940192–2946115 (-)2.135e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)3.75e-12
Glyma.15G154600 hypothetical protein AT2G34900:IMB1:Transcription factor GTE6 1Chr15:12869005–12877308 (-)5.751e-11
Glyma.15G154800 hypothetical protein AT1G30840:PUP4:purine permease 4 1Chr15:12885652–12899379 (+)5.751e-11
Glyma.16G014200 hypothetical protein AT5G12370:SEC10:exocyst complex component sec10 1Chr16:1243163–1253803 (-)4.396e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)2.162e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)5.824e-13
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)5.382e-14
Glyma.16G189000 hypothetical protein NA 1Chr16:35160485–35167548 (-)7.685e-11
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 1Chr16:36871978–36878151 (-)7.568e-11
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)3.376e-11
Glyma.16G213000 hypothetical protein AT1G48380:RHL1:root hair initiation protein root hairless 1 (RHL1) 1Chr16:37118629–37125494 (-)5.528e-11
Glyma.16G213100 hypothetical protein AT3G19180:PARC6:plastid division protein 1Chr16:37126159–37132422 (+)5.151e-11
Glyma.16G213300 hypothetical protein AT1G34130:STT3B:staurosporin and temperature sensitive 3-like b 1Chr16:37138811–37144846 (+)1.291e-12
Glyma.17G113200 hypothetical protein AT2G26600:AT2G26600:Glycosyl hydrolase superfamily protein 1Chr17:8928093–8932122 (-)9.689e-11
Glyma.17G118900 hypothetical protein NA 1Chr17:9401882–9402864 (+)2.25e-12
Glyma.17G219500 hypothetical protein NA 1Chr17:37109440–37111216 (-)3.783e-12
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)6.447e-13