Overview Annotation GWAS Evidence Associated genes

P24122

Metabolite ID
P24122
Deionized mass
134.0353 Da
Average m/z
135.0435
Average RT
14.3209
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
85
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

85 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)1.802e-13
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 2Chr03:1875182–1876855 (+)4.123e-13
Glyma.06G205100 hypothetical protein NA 2Chr06:19392099–19394901 (+)7.03e-11
Glyma.06G206000 hypothetical protein AT5G08110:AT5G08110:UBQ, helicase-c and DEAD-like helicase domain-containing protein 2Chr06:19693187–19711341 (-)8.408e-11
Glyma.06G209300 hypothetical protein NA 2Chr06:20573671–20581076 (-)5.301e-12
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 2Chr10:48805999–48811533 (-)1.257e-14
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)2.898e-15
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)2.898e-15
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)4.925e-13
Glyma.16G209300 hypothetical protein NA 2Chr16:36856833–36863994 (-)6.379e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)5.701e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)5.701e-11
Glyma.02G061700 hypothetical protein AT2G23450:AT2G23450:Protein kinase superfamily protein 1Chr02:5577271–5582873 (-)3.437e-12
Glyma.02G062600 hypothetical protein AT2G23540:AT2G23540:GDSL-like Lipase/Acylhydrolase superfamily protein 1Chr02:5645621–5648965 (+)2.901e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)3.763e-11
Glyma.03G007100 hypothetical protein AT5G17780:AT5G17780:alpha/beta-Hydrolases superfamily protein__AT5G17720:AT5G17720:alpha/beta-Hydrolases superfamily pr… 1Chr03:647777–651152 (-)4.727e-11
Glyma.03G007800 hypothetical protein AT4G26010:AT4G26010:Peroxidase superfamily protein 1Chr03:758088–760465 (-)6.724e-12
Glyma.03G007900 hypothetical protein NA 1Chr03:764330–766878 (-)3.55e-11
Glyma.03G016700 hypothetical protein AT4G00740:QUA3:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr03:1683395–1688893 (-)2.547e-12
Glyma.03G017800 hypothetical protein AT4G00770:TRM9:DUF4378 domain protein 1Chr03:1780719–1783735 (+)1.277e-11
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)9.071e-14
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 1Chr03:2007617–2009871 (+)4.122e-12
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)1.698e-16
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)3.489e-18
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.855e-13
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)3.033e-15
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.044e-16
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.457e-13
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)2.948e-12
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)2.947e-12
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)2.947e-12
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)1.683e-12
Glyma.06G204200 hypothetical protein AT5G08050:AT5G08050:wiskott-aldrich syndrome family protein, putative (DUF1118) 1Chr06:19170925–19173352 (+)2.207e-11
Glyma.06G205000 hypothetical protein AT5G60940:AT5G60940:Transducin/WD40 repeat-like superfamily protein 1Chr06:19370642–19375687 (-)7.03e-11
Glyma.06G205800 AP1A agamous-like MADS-box AT5G60910:AGL8:AGAMOUS-like 8 1Chr06:19583729–19590906 (+)8.408e-11
Glyma.06G207900 hypothetical protein NA 1Chr06:20278974–20282107 (-)8.685e-12
Glyma.06G208000 hypothetical protein AT1G74000:SS3:strictosidine synthase 3 1Chr06:20286288–20288769 (+)8.685e-12
Glyma.06G208900 hypothetical protein NA 1Chr06:20515068–20521900 (-)8.685e-12
Glyma.06G209400 hypothetical protein NA 1Chr06:20622369–20629712 (+)8.685e-12
Glyma.06G209600 hypothetical protein AT1G48960:AT1G48960:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:20638577–20641470 (+)8.685e-12
Glyma.06G210000 hypothetical protein NA 1Chr06:20706632–20708144 (-)8.685e-12
Glyma.06G210100 hypothetical protein NA 1Chr06:20725481–20728890 (-)8.685e-12
Glyma.06G210400 hypothetical protein AT1G03280:AT1G03280:Transcription factor TFIIE, alpha subunit 1Chr06:20768340–20778709 (-)8.685e-12
Glyma.06G210900 hypothetical protein AT3G24330:AT3G24330:O-Glycosyl hydrolases family 17 protein 1Chr06:20942818–20945744 (+)8.685e-12
Glyma.06G211500 hypothetical protein AT5G19950:AT5G19950:tudor domain protein (DUF1767) 1Chr06:21104409–21114116 (-)8.685e-12
Glyma.06G211700 hypothetical protein NA 1Chr06:21226061–21226529 (-)7.563e-12
Glyma.06G211800 hypothetical protein NA 1Chr06:21237649–21239875 (+)7.563e-12
Glyma.06G213600 hypothetical protein NA 1Chr06:21713618–21726865 (+)7.563e-12
Glyma.07G075000 hypothetical protein AT5G60990:AT5G60990:DEA(D/H)-box RNA helicase family protein 1Chr07:6821674–6829551 (-)3.139e-11
Glyma.07G075300 hypothetical protein NA 1Chr07:6843882–6845602 (-)3.139e-11
Glyma.08G136700 hypothetical protein NA 1Chr08:10457207–10460163 (-)3.208e-11
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)9.329e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)4.792e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)2.771e-13
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)2.686e-13
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)2.686e-13
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)2.686e-13
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)2.686e-13
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.312e-12
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.312e-12
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)8.312e-15
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)8.312e-15
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 1Chr12:34708678–34710549 (+)2.444e-12
Glyma.12G198700 hypothetical protein AT5G62990:emb1692:Ubiquitin carboxyl-terminal hydrolase family protein 1Chr12:36001658–36004086 (+)8.167e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)9.295e-14
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)9.295e-14
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)9.72e-13
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.264e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)1.264e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.802e-13
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)1.338e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.898e-14
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.898e-14
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.898e-15
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)4.427e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)5.055e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)8.793e-15
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)3.224e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)2.947e-11
Glyma.16G209000 hypothetical protein NA 1Chr16:36841786–36845498 (-)7.399e-12
Glyma.18G125300 hypothetical protein NA 1Chr18:16402018–16411532 (-)9.874e-11
Glyma.18G129100 hypothetical protein NA 1Chr18:17426745–17444205 (+)1.561e-11
Glyma.18G129200 hypothetical protein AT1G59820:ALA3:aminophospholipid ATPase 3 1Chr18:17461040–17470275 (+)1.561e-11
Glyma.18G129600 hypothetical protein NA 1Chr18:17682371–17682793 (+)1.561e-11
Glyma.18G130400 hypothetical protein NA 1Chr18:18115603–18128112 (+)3.214e-12