Overview Annotation GWAS Evidence Associated genes

P24117

Metabolite ID
P24117
Deionized mass
632.1876 Da
Average m/z
633.1941
Average RT
14.3193
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
12
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

12 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G127800 hypothetical protein NA 1Chr03:34231323–34232268 (+)7.589e-11
Glyma.03G128000 hypothetical protein NA 1Chr03:34248662–34250541 (+)7.589e-11
Glyma.03G128100 hypothetical protein AT2G41210:PIP5K5:phosphatidylinositol- 4-phosphate 5-kinase 5 1Chr03:34252120–34257230 (+)7.589e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)4.967e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)5.068e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)5.068e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)5.068e-11
Glyma.05G164700 hypothetical protein NA 1Chr05:35543931–35549196 (-)2.24e-11
Glyma.05G166400 hypothetical protein NA 1Chr05:35692494–35699192 (+)5.473e-11
Glyma.05G182500 hypothetical protein AT5G65210:TGA1:bZIP transcription factor family protein 1Chr05:37029299–37037313 (+)9.384e-12
Glyma.11G000700 hypothetical protein AT4G34150:AT4G34150:Calcium-dependent lipid-binding (CaLB domain) family protein 1Chr11:33497–35198 (+)1.347e-11
Glyma.16G028100 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 1Chr16:2725294–2733429 (-)5.915e-11