Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P24101

Metabolite ID
P24101
Deionized mass
716.2546 Da
Average m/z
717.2603
Average RT
14.3147
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
43
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

43 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)5.575e-11
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)5.871e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)2.22e-11
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)2.336e-11
Glyma.15G263500 hypothetical protein AT1G79440:ALDH5F1:aldehyde dehydrogenase 5F1 2Chr15:49664672–49682418 (+)2.616e-12
Glyma.01G010200 hypothetical protein AT1G32060:PRK:phosphoribulokinase 1Chr01:993024–997480 (-)1.541e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)4.131e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)4.131e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)4.33e-12
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)7.398e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.921e-11
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 1Chr08:9198213–9201688 (-)9.196e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)5.575e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)5.575e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)5.575e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)5.575e-11
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)2.581e-11
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)2.581e-11
Glyma.08G211100 GLYI-9 putative lactoylglutathione lyase AT1G80160:GLYI7:Lactoylglutathione lyase / glyoxalase I family protein 1Chr08:17046316–17048640 (-)4.868e-13
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)6.973e-15
Glyma.11G061800 hypothetical protein NA 1Chr11:4632831–4633552 (+)7.472e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)2.046e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.046e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.329e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)1.329e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)1.329e-11
Glyma.14G013500 hypothetical protein AT4G25434:NUDT10:nudix hydrolase homolog 10 1Chr14:1009519–1014238 (+)4.196e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.963e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)1.922e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)2.336e-11
Glyma.14G201800 hypothetical protein AT5G58390:AT5G58390:Peroxidase superfamily protein 1Chr14:46728613–46733836 (+)4.883e-11
Glyma.14G204400 hypothetical protein AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 1Chr14:46936057–46943868 (-)8.48e-14
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)3.529e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.04e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.383e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.04e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.04e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)3.742e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.315e-11
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)4.01e-11
Glyma.18G045500 hypothetical protein NA 1Chr18:3942686–3943765 (-)9.904e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)4.519e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)1.094e-12