Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P24031

Metabolite ID
P24031
Deionized mass
716.2629 Da
Average m/z
717.2654
Average RT
14.2966
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
81
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

81 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G045600 hypothetical protein NA 3Chr01:5242432–5245038 (-)2.393e-17
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)9.602e-11
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)2.866e-12
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)2.866e-12
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)2.866e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)8.779e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)8.779e-12
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)9.731e-11
Glyma.20G013100 hypothetical protein NA 2Chr20:1134080–1135710 (-)5.159e-12
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 2Chr20:34151918–34155417 (+)1.7e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 2Chr20:34984922–34988496 (+)3.107e-11
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)1.054e-16
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… 1Chr01:5265956–5271379 (-)2.393e-17
Glyma.01G046600 hypothetical protein AT1G14280:PKS2:phytochrome kinase substrate 2 1Chr01:5379316–5382027 (-)2.071e-13
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)1.151e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)2.332e-11
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)5.094e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.481e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.481e-11
Glyma.05G217100 hypothetical protein AT1G64440:RHD1:NAD(P)-binding Rossmann-fold superfamily protein 1Chr05:39735139–39739763 (+)2.652e-12
Glyma.06G081600 hypothetical protein AT5G11490:AT5G11490:adaptin family protein 1Chr06:6273644–6283819 (+)2.735e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)9.088e-12
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)6.901e-11
Glyma.08G330400 hypothetical protein NA 1Chr08:44820327–44823668 (+)3.274e-12
Glyma.08G330500 hypothetical protein AT3G07680:p24beta2:emp24/gp25L/p24 family/GOLD family protein 1Chr08:44824324–44827127 (-)3.274e-12
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)4.29e-11
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)7.492e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)5.685e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)4.789e-11
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)2.866e-12
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)2.866e-12
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)2.866e-12
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)5.417e-11
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)2.866e-12
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)2.866e-12
Glyma.09G276300 WNK10 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr09:49161113–49166087 (+)1.691e-11
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)4.301e-11
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)2.626e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)2.351e-11
Glyma.12G054700 hypothetical protein AT3G45140:LOX2:lipoxygenase 2 1Chr12:3949453–3957386 (-)7.037e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.326e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.326e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)1.163e-12
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)1.163e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.998e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.998e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)8.779e-12
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)1.23e-12
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)5.573e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)6.593e-13
Glyma.14G071600 hypothetical protein AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein 1Chr14:6016839–6019954 (+)1.132e-11
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)4.44e-12
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)4.44e-12
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)3.802e-12
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)7.259e-11
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)7.259e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.14e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)8.634e-12
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)2.715e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)2.715e-11
Glyma.16G051100 hypothetical protein NA 1Chr16:4896279–4898219 (-)1.251e-11
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)5.984e-12
Glyma.16G058100 hypothetical protein AT5G14180:MPL1:Myzus persicae-induced lipase 1 1Chr16:5685464–5692098 (+)4.369e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)2.459e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)2.811e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.686e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)2.496e-15
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)9.602e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)6.597e-12
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)6.597e-12
Glyma.18G021700 hypothetical protein NA 1Chr18:1590986–1596262 (-)7.807e-11
Glyma.18G091600 hypothetical protein NA 1Chr18:9165090–9166656 (-)4.026e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)4.509e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)4.509e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)7.501e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)7.501e-13
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)3.88e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)2.241e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)7.709e-12
Glyma.20G098500 hypothetical protein AT2G39470:PnsL1:PsbP-like protein 2 1Chr20:34179794–34183432 (-)2.719e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)6.077e-11