Overview Annotation GWAS Evidence Associated genes

P23992

Metabolite ID
P23992
Deionized mass
260.1154 Da
Average m/z
261.1236
Average RT
14.2858
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
62
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

62 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 4Chr16:36856833–36863994 (-)3.63e-13
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)6.457e-13
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)3.963e-12
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)5.016e-11
Glyma.09G237900 hypothetical protein NA 2Chr09:45960580–45964267 (+)6.297e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)2.911e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)2.911e-13
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)1.119e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)6.457e-13
Glyma.01G154500 hypothetical protein AT1G31780:AT1G31780:oligomeric golgi complex subunit 1Chr01:49196540–49201707 (+)1.186e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)7.662e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)7.662e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)8.844e-12
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)2.432e-11
Glyma.04G044600 hypothetical protein NA 1Chr04:3556928–3559705 (-)2.001e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.601e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.342e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)3.75e-13
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)2.832e-13
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)3.241e-12
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)1.224e-11
Glyma.07G071800 hypothetical protein AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein 1Chr07:6523253–6526707 (+)4.919e-11
Glyma.08G112600 hypothetical protein NA 1Chr08:8660670–8663379 (-)3.38e-11
Glyma.08G112700 hypothetical protein NA 1Chr08:8661027–8661191 (+)3.38e-11
Glyma.09G212100 hypothetical protein AT4G19040:EDR2:ENHANCED DISEASE RESISTANCE 2 1Chr09:43601727–43616030 (-)7.919e-11
Glyma.09G237700 hypothetical protein AT4G21680:NRT1.8:NITRATE TRANSPORTER 1.8 1Chr09:45948581–45953681 (-)1.067e-11
Glyma.09G238200 NIP2-1 putative Si transporter NIP2-1 NA 1Chr09:46029192–46034136 (+)6.334e-14
Glyma.09G238800 hypothetical protein AT3G28910:MYB30:myb domain protein 30 1Chr09:46114284–46116303 (-)6.693e-12
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)1.219e-11
Glyma.09G270200 hypothetical protein AT5G01020:AT5G01020:Protein kinase superfamily protein 1Chr09:48725417–48728520 (-)3.354e-11
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)1.428e-12
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)2.997e-11
Glyma.11G094700 hypothetical protein AT5G08280:HEMC:hydroxymethylbilane synthase 1Chr11:7190632–7195838 (-)1.282e-13
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)2.803e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)3.992e-13
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)3.992e-13
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)6.853e-13
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)6.853e-13
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.911e-13
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)1.947e-17
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)5.115e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)2.793e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)5.115e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)5.115e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.177e-12
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)9.745e-11
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)7.391e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)9.085e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)4.497e-13
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)5.192e-13
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)5.447e-11
Glyma.16G196900 hypothetical protein NA 1Chr16:35841279–35846894 (-)9.094e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)1.089e-12
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)3.963e-12
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)4.681e-14
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)4.681e-14
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)6.626e-16
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)5.016e-11
Glyma.17G258400 hypothetical protein AT1G30755:AT1G30755:elongation factor G, putative (DUF668) 1Chr17:41248979–41254225 (+)5.843e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.98e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.98e-11
Glyma.19G129500 hypothetical protein AT2G41160:AT2G41160:Ubiquitin-associated (UBA) protein 1Chr19:38884116–38901744 (-)5.061e-11