Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P23897

Metabolite ID
P23897
Deionized mass
792.2808 Da
Average m/z
793.2866
Average RT
14.2504
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
49
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

49 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G313500 hypothetical protein NA 3Chr06:50191600–50203098 (-)2.042e-12
Glyma.16G209300 hypothetical protein NA 3Chr16:36856833–36863994 (-)6.353e-12
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)6.701e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)7.537e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)2.515e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)2.515e-12
Glyma.02G125700 hypothetical protein NA 1Chr02:12589185–12591860 (-)7.148e-13
Glyma.02G126300 hypothetical protein NA 1Chr02:12670653–12677305 (+)1.415e-11
Glyma.02G126400 hypothetical protein NA 1Chr02:12678071–12683492 (+)1.415e-11
Glyma.02G126800 hypothetical protein AT1G13580:LAG13:LAG1 longevity assurance-like protein__AT3G25540:LAG1:TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain co… 1Chr02:12771578–12777488 (+)1.415e-11
Glyma.02G127000 hypothetical protein AT1G13580:LAG13:LAG1 longevity assurance-like protein 1Chr02:12798511–12806795 (+)3.198e-11
Glyma.02G127400 hypothetical protein AT1G26190:AT1G26190:Phosphoribulokinase / Uridine kinase family 1Chr02:12849745–12869066 (+)1.415e-11
Glyma.02G127600 hypothetical protein NA 1Chr02:12976382–12983547 (+)1.415e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)8.257e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)7.081e-13
Glyma.05G147700 hypothetical protein NA 1Chr05:34199925–34202541 (+)9.841e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)3.446e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)7.209e-12
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)6.493e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.188e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.278e-14
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)5.217e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)2.719e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)7.537e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)7.537e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)7.537e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)7.537e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)4.861e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)5.421e-15
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)2.634e-14
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)2.634e-14
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)2.634e-14
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)2.634e-14
Glyma.11G179000 hypothetical protein AT2G27230:LHW:transcription factor-like protein 1Chr11:24412040–24417199 (+)5.681e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)9.093e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)9.093e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.515e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.946e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)9.092e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.946e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.946e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.375e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)5.668e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)5.668e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)6.498e-11
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)6.701e-11
Glyma.17G258400 hypothetical protein AT1G30755:AT1G30755:elongation factor G, putative (DUF668) 1Chr17:41248979–41254225 (+)4.06e-13
Glyma.20G106400 hypothetical protein AT5G23590:AT5G23590:DNAJ heat shock N-terminal domain-containing protein 1Chr20:34888699–34893605 (-)4.206e-11
Glyma.20G120200 hypothetical protein NA 1Chr20:36268998–36282456 (-)1.871e-11