Overview Annotation GWAS Evidence Associated genes

P23882

Metabolite ID
P23882
Deionized mass
256.1669 Da
Average m/z
257.1731
Average RT
14.2437
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
15
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

15 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G183500 hypothetical protein AT5G50000:AT5G50000:Protein kinase superfamily protein 2Chr06:15828917–15834067 (+)3.675e-11
Glyma.01G022300 hypothetical protein NA 1Chr01:2215383–2217438 (+)4.98e-11
Glyma.03G143300 hypothetical protein NA 1Chr03:35907767–35909994 (+)3.504e-11
Glyma.03G143600 hypothetical protein NA 1Chr03:35928279–35931862 (-)3.504e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)3.447e-14
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)3.447e-14
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)3.447e-14
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)3.447e-14
Glyma.10G080400 hypothetical protein AT2G33990:iqd9:IQ-domain 9 1Chr10:9454616–9455485 (+)3.91e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.896e-12
Glyma.10G081300 hypothetical protein NA 1Chr10:9621308–9625766 (-)3.91e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)7.236e-13
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)2.175e-11
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)1.014e-13
Glyma.18G298800 hypothetical protein NA 1Chr18:57633577–57639546 (+)3.054e-12