Overview Annotation GWAS Evidence Associated genes

P23685

Metabolite ID
P23685
Deionized mass
492.2166 Da
Average m/z
493.2250
Average RT
14.1821
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
27
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

27 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.428e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)1.401e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.947e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)6.614e-14
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)6.614e-14
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)2.977e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)4.897e-11
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)2.977e-11
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)2.977e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)4.897e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)4.137e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)3.305e-12
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)3.305e-12
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)3.384e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)3.384e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)3.384e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)3.384e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)2.001e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.555e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.555e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)7.459e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)7.459e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)6.482e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)6.482e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)6.482e-11
Glyma.15G140400 hypothetical protein NA 1Chr15:11495189–11495691 (+)6.012e-11
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)2.685e-12