Overview Annotation GWAS Evidence Associated genes

P23670

Metabolite ID
P23670
Deionized mass
532.1883 Da
Average m/z
533.1964
Average RT
14.1765
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
7
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

7 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.20G244900 hypothetical protein NA 5Chr20:47494663–47553301 (+)2.698e-14
Glyma.20G245100 G2DT glycinol 2-dimethylallyltransferase NA 2Chr20:47561270–47568860 (+)2.698e-14
Glyma.20G244400 hypothetical protein AT3G55020:AT3G55020:Ypt/Rab-GAP domain of gyp1p superfamily protein 1Chr20:47452963–47461586 (+)2.698e-14
Glyma.20G245000 hypothetical protein NA 1Chr20:47556847–47557697 (+)6.382e-13
Glyma.20G245300 hypothetical protein AT1G74040:IMS1:2-isopropylmalate synthase 1__AT1G18500:MAML-4:methylthioalkylmalate synthase-like 4 1Chr20:47576083–47583477 (+)5.576e-12
Glyma.20G246200 hypothetical protein AT2G43330:INT1:inositol transporter 1 1Chr20:47637362–47643056 (-)3.272e-12
Glyma.20G246400 hypothetical protein AT3G12250:TGA6:TGACG motif-binding factor 6 1Chr20:47647701–47654066 (-)1.159e-12