Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P23601

Metabolite ID
P23601
Deionized mass
387.2181 Da
Average m/z
388.2269
Average RT
14.1635
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
46
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

46 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)2.787e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)2.787e-11
Glyma.02G115900 hypothetical protein AT1G26480:GRF12:ral regulatory factor 12 1Chr02:11280858–11285984 (+)8.161e-12
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)7.808e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)7.321e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)9.799e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.532e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.029e-15
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.886e-12
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)1.387e-12
Glyma.08G114800 hypothetical protein AT5G19830:AT5G19830:Peptidyl-tRNA hydrolase family protein 1Chr08:8792663–8798214 (-)6.085e-13
Glyma.08G115400 hypothetical protein NA 1Chr08:8848959–8851344 (+)7.318e-13
Glyma.08G115700 hypothetical protein AT1G29120:AT1G29120:Hydrolase-like protein family 1Chr08:8868075–8876513 (+)7.947e-11
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)9.264e-11
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)8.014e-13
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)1.833e-12
Glyma.09G252000 hypothetical protein AT2G40730:CTEXP:kinase family with ARM repeat domain-containing protein 1Chr09:47233101–47242848 (+)9.113e-11
Glyma.09G252300 hypothetical protein AT5G16520:AT5G16520:uncharacterized protein 1Chr09:47254519–47261787 (-)9.113e-11
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)8.223e-12
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)8.223e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)6.735e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.838e-12
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)6.76e-13
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)2.148e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)7.334e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)7.333e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)7.333e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)7.333e-11
Glyma.11G125600 hypothetical protein AT2G46200:AT2G46200:U11/U12 small nuclear ribonucleoprotein 1Chr11:9540747–9545520 (-)2.5e-11
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)2.958e-12
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)1.009e-11
Glyma.14G071600 hypothetical protein AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein 1Chr14:6016839–6019954 (+)5.158e-11
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)5.605e-12
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)5.605e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)4.621e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)8.088e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)4.621e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)4.621e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.473e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)9.844e-13
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)3.714e-11
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)8.511e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)2.296e-12
Glyma.18G263300 hypothetical protein AT5G39420:cdc2cAt:CDC2C 1Chr18:54865827–54872924 (-)7.557e-13
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)4.479e-16
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)1.736e-18