Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P23546

Metabolite ID
P23546
Deionized mass
952.2947 Da
Average m/z
953.3033
Average RT
14.1535
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
40
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

40 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G166400 hypothetical protein AT4G36080:AT4G36080:phosphotransferases/inositol or phosphatidylinositol kinase 2Chr01:50404781–50436297 (-)6.282e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)4.837e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.587e-14
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.587e-14
Glyma.20G114400 hypothetical protein AT1G68585:AT1G68585:uncharacterized protein 2Chr20:35614355–35616709 (-)1.693e-12
Glyma.20G218500 hypothetical protein AT4G10465:AT4G10465:Heavy metal transport/detoxification superfamily protein__AT2G18196:AT2G18196:Heavy metal transport… 2Chr20:45428471–45432099 (+)6.814e-13
Glyma.03G147800 hypothetical protein NA 1Chr03:36338586–36339360 (-)5.781e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)9.819e-12
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)7.728e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)1.077e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)2.06e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.29e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.921e-13
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)1.592e-11
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)2.056e-11
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)2.056e-11
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)2.056e-11
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)1.022e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)8.222e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)8.222e-11
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)4.688e-13
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)4.688e-13
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)1.731e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.503e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)4.837e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)4.837e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)4.837e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)4.837e-11
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)4.278e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)4.864e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)4.864e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)7.162e-13
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)7.162e-13
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.587e-14
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)4.766e-11
Glyma.14G201800 hypothetical protein AT5G58390:AT5G58390:Peroxidase superfamily protein 1Chr14:46728613–46733836 (+)4.665e-11
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)7.551e-11
Glyma.17G189300 hypothetical protein NA 1Chr17:25644440–25649489 (-)1.278e-12
Glyma.19G189600 hypothetical protein AT2G36620:RPL24A:ribosomal protein L24 1Chr19:44744021–44746094 (+)8.302e-11
Glyma.20G129900 hypothetical protein NA 1Chr20:37091399–37092697 (-)8.895e-12