Overview Annotation GWAS Evidence Associated genes

P23525

Metabolite ID
P23525
Deionized mass
668.2838 Da
Average m/z
669.2966
Average RT
14.1492
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
17
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

17 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G191400 hypothetical protein AT3G48380:AT3G48380:Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 1Chr04:46220242–46235879 (+)7.345e-16
Glyma.08G109000 SUB1 NA 1Chr08:8364770–8373803 (-)3.787e-12
Glyma.08G109400 CHS1 AT5G13930:TT4:Chalcone and stilbene synthase family protein 1Chr08:8391364–8394840 (+)8.575e-12
Glyma.08G109700 GmJ1 AT4G13830:J20:DNAJ-like 20 1Chr08:8419650–8422508 (+)1.244e-11
Glyma.08G110000 hypothetical protein AT3G23840:AT3G23840:HXXXD-type acyl-transferase family protein 1Chr08:8438346–8442806 (-)3.787e-12
Glyma.08G111700 hypothetical protein NA 1Chr08:8604527–8606424 (-)4.677e-13
Glyma.08G117700 hypothetical protein NA 1Chr08:9080318–9084658 (-)5.982e-11
Glyma.08G118600 hypothetical protein AT1G29300:UNE1:intracellular protein transporter, putative (DUF641) 1Chr08:9169843–9172229 (-)1.35e-11
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 1Chr08:9198213–9201688 (-)2.444e-12
Glyma.08G182000 hypothetical protein NA 1Chr08:14601875–14604750 (+)2.935e-11
Glyma.08G182500 hypothetical protein NA 1Chr08:14639429–14643788 (+)8.782e-12
Glyma.08G183500 SWEET24 sugar efflux transporter SWEET24 AT5G13170:SAG29:senescence-associated 29 1Chr08:14724384–14726579 (+)8.437e-13
Glyma.09G270200 hypothetical protein AT5G01020:AT5G01020:Protein kinase superfamily protein 1Chr09:48725417–48728520 (-)9.162e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)5.423e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.786e-14
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)5.423e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)5.423e-12