Overview Annotation GWAS Evidence Associated genes

P23524

Metabolite ID
P23524
Deionized mass
280.1077 Da
Average m/z
281.1146
Average RT
14.1492
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
6
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

6 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)7.783e-14
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.296e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.296e-11
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)1.947e-11
Glyma.13G184500 hypothetical protein NA 1Chr13:29829471–29834027 (+)3.56e-11
Glyma.13G185500 hypothetical protein AT5G04980:AT5G04980:DNAse I-like superfamily protein 1Chr13:29943323–29949631 (+)2.266e-13