Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P23317

Metabolite ID
P23317
Deionized mass
422.0790 Da
Average m/z
423.0871
Average RT
14.0957
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
43
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

43 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.20G081200 hypothetical protein NA 3Chr20:30504457–30509624 (-)8.299e-12
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 2Chr08:8768854–8772973 (-)2.706e-12
Glyma.14G176900 SGF14K 14-3-3 protein SGF14k AT1G78300:GRF2:ral regulatory factor 2 2Chr14:43637893–43642553 (+)2.062e-12
Glyma.20G079600 hypothetical protein AT3G23980:BLI:BLISTER 2Chr20:29608038–29627190 (+)8.299e-12
Glyma.20G080600 hypothetical protein NA 2Chr20:30128487–30129839 (+)1.367e-12
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)5.644e-11
Glyma.08G109400 CHS1 AT5G13930:TT4:Chalcone and stilbene synthase family protein 1Chr08:8391364–8394840 (+)6.351e-12
Glyma.08G111700 hypothetical protein NA 1Chr08:8604527–8606424 (-)9.197e-11
Glyma.08G113600 hypothetical protein AT1G55320:AAE18:acyl-activating enzyme 18 1Chr08:8713767–8722379 (-)3.102e-11
Glyma.08G114800 hypothetical protein AT5G19830:AT5G19830:Peptidyl-tRNA hydrolase family protein 1Chr08:8792663–8798214 (-)4.702e-11
Glyma.08G115400 hypothetical protein NA 1Chr08:8848959–8851344 (+)1.385e-12
Glyma.08G115700 hypothetical protein AT1G29120:AT1G29120:Hydrolase-like protein family 1Chr08:8868075–8876513 (+)4.846e-13
Glyma.08G116400 hypothetical protein NA 1Chr08:8947598–8949573 (-)1.261e-12
Glyma.08G116700 hypothetical protein NA 1Chr08:8997512–9003565 (+)1.791e-11
Glyma.08G116800 hypothetical protein AT1G29240:AT1G29240:transcription initiation factor TFIID subunit, putative (DUF688) 1Chr08:9006479–9010442 (-)6.423e-11
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 1Chr08:9065033–9071774 (-)6.184e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)6.184e-11
Glyma.08G118500 hypothetical protein NA 1Chr08:9161382–9162471 (+)2.436e-11
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 1Chr08:9198213–9201688 (-)8.279e-12
Glyma.08G180900 hypothetical protein AT5G64570:XYL4:beta-D-xylosidase 4__AT5G09730:BXL3:beta-xylosidase 3 1Chr08:14516542–14521137 (+)4.232e-11
Glyma.14G176600 hypothetical protein NA 1Chr14:43565478–43570243 (+)8.225e-13
Glyma.14G177100 hypothetical protein AT1G22450:COX6B:cytochrome C oxidase 6B 1Chr14:43661177–43665659 (+)5.885e-12
Glyma.14G179900 hypothetical protein NA 1Chr14:44227886–44232217 (-)1.198e-13
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)4.243e-12
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 1Chr16:30514629–30519598 (+)2.808e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)3.161e-13
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)3.161e-13
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)1.479e-12
Glyma.18G033800 hypothetical protein NA 1Chr18:2600457–2604130 (+)1.008e-12
Glyma.20G077300 hypothetical protein AT3G24230:AT3G24230:Pectate lyase family protein__AT4G13710:AT4G13710:Pectin lyase-like superfamily protein 1Chr20:27993600–27999492 (+)4.382e-12
Glyma.20G078300 hypothetical protein AT3G22520:AT3G22520:spindle assembly abnormal protein 1Chr20:29039678–29043503 (+)8.3e-12
Glyma.20G079100 PHD finger protein ING1 AT3G24010:ING1:RING/FYVE/PHD zinc finger superfamily protein 1Chr20:29399847–29413517 (+)8.299e-12
Glyma.20G079200 hypothetical protein NA 1Chr20:29406700–29409909 (+)8.299e-12
Glyma.20G079400 hypothetical protein AT1G04630:MEE4:GRIM-19 protein 1Chr20:29572770–29576530 (+)8.299e-12
Glyma.20G080900 hypothetical protein AT2G34260:WDR55:transducin family protein / WD-40 repeat family protein 1Chr20:30415421–30420479 (+)8.299e-12
Glyma.20G081300 hypothetical protein NA 1Chr20:30615671–30617037 (-)8.299e-12
Glyma.20G081400 hypothetical protein AT4G13560:UNE15:Late embryosis abundant protein (LEA) family protein 1Chr20:30710503–30711743 (+)3.044e-11
Glyma.20G081500 hypothetical protein AT4G13550:AT4G13550:putative triglyceride lipase 1Chr20:30754950–30775867 (+)8.299e-12
Glyma.20G081800 hypothetical protein NA 1Chr20:30816449–30820553 (+)8.299e-12
Glyma.20G082200 hypothetical protein NA 1Chr20:30945743–30948018 (+)8.299e-12
Glyma.20G082400 hypothetical protein NA 1Chr20:31002290–31006799 (+)8.3e-12
Glyma.20G082500 hypothetical protein NA 1Chr20:31130807–31133107 (-)1.367e-12
Glyma.20G082700 hypothetical protein NA 1Chr20:31135788–31138814 (-)8.299e-12