Overview Annotation GWAS Evidence Associated genes

P23300

Metabolite ID
P23300
Deionized mass
496.0973 Da
Average m/z
497.1065
Average RT
14.0911
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
54
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

54 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)6e-12
Glyma.09G053800 hypothetical protein NA 3Chr09:4737413–4755632 (-)7.722e-12
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)1.223e-12
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)1.757e-11
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)9.058e-13
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)3.443e-11
Glyma.16G117400 hypothetical protein NA 2Chr16:26234552–26238233 (-)1.715e-13
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)1.757e-11
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 2Chr16:35831912–35835153 (+)1.072e-11
Glyma.18G100200 hypothetical protein NA 2Chr18:10512806–10522231 (+)1.002e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)6e-12
Glyma.02G113000 hypothetical protein AT1G69370:CM3:chorismate mutase 3 1Chr02:10939096–10941983 (-)6.391e-12
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)3.515e-12
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)4.213e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.677e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)9.808e-11
Glyma.05G130700 hypothetical protein AT2G34560:CCP1:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr05:32376592–32384905 (+)1.226e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.326e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)9.148e-18
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.813e-19
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)9.07e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)9.071e-11
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)1.366e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)4.356e-12
Glyma.09G276300 WNK10 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr09:49161113–49166087 (+)3.704e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)5.217e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)5.217e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)5.217e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)5.217e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)2.091e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)3.575e-14
Glyma.11G239000 hypothetical protein AT5G10120:AT5G10120:Ethylene insensitive 3 family protein 1Chr11:33337797–33339122 (-)8.082e-12
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.223e-12
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)5.184e-12
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)3.443e-11
Glyma.14G201800 hypothetical protein AT5G58390:AT5G58390:Peroxidase superfamily protein 1Chr14:46728613–46733836 (+)6.266e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)4.419e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)7.223e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)4.419e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)4.419e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)9.249e-13
Glyma.16G066000 hypothetical protein AT5G40660:AT5G40660:ATP12 protein-like protein 1Chr16:6570689–6574950 (+)1.108e-12
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)1.535e-11
Glyma.16G117700 hypothetical protein NA 1Chr16:26279957–26283458 (+)4.193e-11
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)1.757e-11
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)1.757e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)7.896e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)3.589e-16
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)6.189e-11
Glyma.16G196400 hypothetical protein AT5G07270:XBAT33:uncharacterized protein 1Chr16:35782198–35790495 (-)2.416e-11
Glyma.16G196900 hypothetical protein NA 1Chr16:35841279–35846894 (-)1.046e-12
Glyma.18G099600 hypothetical protein AT4G27040:VPS22:EAP30/Vps36 family protein 1Chr18:10453308–10458891 (-)9.077e-12
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 1Chr18:10459970–10464888 (-)2.014e-11
Glyma.18G099900 hypothetical protein AT1G47578:AT1G47578:Biotin/lipoate A/B protein ligase family__AT4G31050:AT4G31050:Biotin/lipoate A/B protein ligase fam… 1Chr18:10471443–10475076 (+)9.077e-12