Overview Annotation GWAS Evidence Associated genes

P23254

Metabolite ID
P23254
Deionized mass
248.0575 Da
Average m/z
249.0663
Average RT
14.0798
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
11
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

11 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)6.512e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.857e-13
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)4.77e-13
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)6.418e-14
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)2.914e-13
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)2.914e-13
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)2.914e-13
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)2.914e-13
Glyma.13G136500 hypothetical protein NA 1Chr13:24910198–24916336 (-)1.418e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)8.213e-11
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)2.377e-11