Overview Annotation GWAS Evidence Associated genes

P23238

Metabolite ID
P23238
Deionized mass
163.0320 Da
Average m/z
164.0377
Average RT
14.0755
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
13
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

13 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)1.518e-11
Glyma.01G034700 hypothetical protein NA 1Chr01:3599923–3602578 (-)2.893e-11
Glyma.01G037200 hypothetical protein NA 1Chr01:3946315–3948100 (-)9.754e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)1.134e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)1.604e-11
Glyma.09G272300 hypothetical protein AT5G01950:AT5G01950:Leucine-rich repeat protein kinase family protein 1Chr09:48873276–48883421 (-)5.506e-12
Glyma.09G272800 hypothetical protein AT3G08670:AT3G08670:serine/arginine repetitive matrix-like protein 1Chr09:48916725–48921396 (+)5.506e-12
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)2.512e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)2.512e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)2.512e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)2.512e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)6.348e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.248e-11