Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P22882

Metabolite ID
P22882
Deionized mass
420.1922 Da
Average m/z
421.1978
Average RT
13.9734
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
62
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

62 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G150100 hypothetical protein AT2G44450:BGLU15:beta glucosidase 15 2Chr08:11525692–11536927 (+)3.822e-13
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.385e-12
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)6.329e-13
Glyma.14G176900 SGF14K 14-3-3 protein SGF14k AT1G78300:GRF2:ral regulatory factor 2 2Chr14:43637893–43642553 (+)3.794e-14
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)8.319e-14
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 2Chr20:34984922–34988496 (+)5.153e-11
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)7.185e-12
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)2.057e-12
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)3.189e-12
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)2.575e-13
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)3.354e-11
Glyma.04G237000 hypothetical protein AT1G31910:AT1G31910:GHMP kinase family protein 1Chr04:50558708–50569783 (+)1.184e-13
Glyma.04G237200 hypothetical protein AT3G52210:AT3G52210:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr04:50576216–50582296 (-)1.184e-13
Glyma.04G237500 hypothetical protein AT5G15940:AT5G15940:NAD(P)-binding Rossmann-fold superfamily protein__AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold … 1Chr04:50604264–50609423 (+)1.184e-13
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.457e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.195e-12
Glyma.06G078400 hypothetical protein AT4G31290:AT4G31290:ChaC-like family protein 1Chr06:6068728–6071360 (+)2.766e-11
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)3.503e-12
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)1.34e-11
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)2.326e-15
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.629e-11
Glyma.09G252000 hypothetical protein AT2G40730:CTEXP:kinase family with ARM repeat domain-containing protein 1Chr09:47233101–47242848 (+)3.181e-11
Glyma.09G252300 hypothetical protein AT5G16520:AT5G16520:uncharacterized protein 1Chr09:47254519–47261787 (-)3.181e-11
Glyma.11G161900 hypothetical protein NA 1Chr11:14992307–14994409 (-)3.286e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.084e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)6.91e-18
Glyma.13G156200 hypothetical protein AT1G80710:DRS1:DROUGHT SENSITIVE 1 1Chr13:27115515–27118951 (+)2.899e-13
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)6.757e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)4.898e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.723e-12
Glyma.14G134600 hypothetical protein AT4G31450:AT4G31450:RING/U-box superfamily protein 1Chr14:23491895–23497735 (-)8.356e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)6.329e-13
Glyma.14G176600 hypothetical protein NA 1Chr14:43565478–43570243 (+)1.699e-13
Glyma.14G177100 hypothetical protein AT1G22450:COX6B:cytochrome C oxidase 6B 1Chr14:43661177–43665659 (+)9.358e-14
Glyma.14G177500 hypothetical protein AT3G13620:PUT4:Amino acid permease family protein 1Chr14:43740577–43742476 (-)7.264e-15
Glyma.14G178600 hypothetical protein NA 1Chr14:43963455–43970275 (+)2.824e-11
Glyma.14G178700 hypothetical protein NA 1Chr14:43978407–43980052 (+)2.824e-11
Glyma.14G178800 hypothetical protein AT1G28210:ATJ1:DNAJ heat shock family protein 1Chr14:43987725–44003499 (-)2.824e-11
Glyma.14G179900 hypothetical protein NA 1Chr14:44227886–44232217 (-)2.505e-11
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)2.913e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.617e-14
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)5.869e-14
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.617e-14
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.617e-14
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)4.749e-12
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)5.442e-11
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)8.883e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)8.883e-11
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)9.403e-12
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 1Chr16:30514629–30519598 (+)1.809e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)2.579e-13
Glyma.16G145200 hypothetical protein NA 1Chr16:30586018–30588859 (-)6.993e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)2.579e-13
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)1.004e-11
Glyma.17G212300 hypothetical protein AT5G25310:AT5G25310:Exostosin family protein 1Chr17:35122156–35129564 (-)1.121e-12
Glyma.17G215300 hypothetical protein AT5G25265:AT5G25265:Hyp O-arabinosyltransferase-like protein 1Chr17:36142245–36146771 (-)7.673e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)8.527e-11
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)8.319e-14
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)1.772e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)8.227e-13
Glyma.19G247800 hypothetical protein NA 1Chr19:49385792–49388122 (-)6.409e-11
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)5.763e-11