Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P22816

Metabolite ID
P22816
Deionized mass
1128.2889 Da
Average m/z
1129.2928
Average RT
13.9564
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
59
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

59 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 2Chr03:2423540–2428634 (-)1.223e-16
Glyma.01G173900 hypothetical protein NA 1Chr01:51092004–51094319 (+)2.815e-11
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 1Chr03:2007617–2009871 (+)1.555e-11
Glyma.03G041900 hypothetical protein NA 1Chr03:5313339–5315847 (-)4.19e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)2.538e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)5.63e-13
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)1.328e-12
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)2.265e-13
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)2.007e-15
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)3.867e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)3.648e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.867e-11
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)5.322e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)5.161e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)5.161e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)5.161e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)5.336e-13
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)5.336e-13
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)4.474e-12
Glyma.07G069400 hypothetical protein AT2G46020:BRM:transcription regulatory protein SNF2 1Chr07:6270176–6283087 (-)6.68e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)5.414e-13
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)8.881e-11
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)8.881e-11
Glyma.09G018700 hypothetical protein NA 1Chr09:1470411–1472672 (-)6.252e-11
Glyma.09G019800 VAMP721D vesicle-associated membrane protein 721d NA 1Chr09:1540660–1547761 (+)4.76e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)9.878e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)4.301e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)4.677e-11
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)7.371e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.343e-17
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)3.119e-11
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)3.119e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.313e-16
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)3.426e-16
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.313e-16
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.313e-16
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)7.808e-11
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)3.613e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)6.46e-14
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)5.215e-15
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)1.977e-12
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)1.977e-12
Glyma.18G099600 hypothetical protein AT4G27040:VPS22:EAP30/Vps36 family protein 1Chr18:10453308–10458891 (-)6.119e-11
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 1Chr18:10459970–10464888 (-)4.32e-11
Glyma.18G099900 hypothetical protein AT1G47578:AT1G47578:Biotin/lipoate A/B protein ligase family__AT4G31050:AT4G31050:Biotin/lipoate A/B protein ligase fam… 1Chr18:10471443–10475076 (+)6.119e-11
Glyma.18G100200 hypothetical protein NA 1Chr18:10512806–10522231 (+)6.119e-11
Glyma.18G106600 hypothetical protein NA 1Chr18:11947553–11951868 (+)9.553e-12
Glyma.18G106700 hypothetical protein NA 1Chr18:11956201–11957138 (-)9.877e-11
Glyma.18G106800 hypothetical protein AT2G42880:MPK20:MAP kinase 20 1Chr18:11959920–11966545 (-)9.877e-11
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)7.658e-11
Glyma.18G213300 hypothetical protein AT5G43180:AT5G43180:transmembrane protein, putative (Protein of unknown function, DUF599) 1Chr18:50026808–50028261 (-)2.484e-18
Glyma.18G213400 hypothetical protein NA 1Chr18:50037003–50043647 (+)2.484e-18
Glyma.18G227400 hypothetical protein AT2G45720:AT2G45720:ARM repeat superfamily protein 1Chr18:51650951–51654636 (-)6.134e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)7.51e-11
Glyma.18G231500 hypothetical protein NA 1Chr18:52019138–52019828 (-)5.601e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)2.805e-14
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.234e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.234e-11
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)1.215e-12