Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P22628

Metabolite ID
P22628
Deionized mass
158.1068 Da
Average m/z
159.1145
Average RT
13.9122
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
69
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

69 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 3Chr19:1134716–1143232 (+)2.394e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)7.166e-11
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)5.607e-15
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)5.219e-11
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)4.86e-12
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)1.474e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)3.981e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)3.981e-12
Glyma.01G234100 hypothetical protein AT5G13270:RARE1:Pentatricopeptide repeat (PPR) superfamily protein 1Chr01:56022128–56026001 (+)1.825e-12
Glyma.02G044600 hypothetical protein NA 1Chr02:4131829–4134877 (+)2.332e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)9.231e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)3.71e-12
Glyma.02G253300 hypothetical protein NA 1Chr02:44063023–44065910 (-)6.39e-11
Glyma.03G001400 hypothetical protein AT2G38610:AT2G38610:RNA-binding KH domain-containing protein 1Chr03:160599–165525 (+)4.54e-13
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)1.121e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.295e-13
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)4.981e-12
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)9.477e-13
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)3.363e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)5.056e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)5.056e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)5.056e-11
Glyma.05G149300 hypothetical protein AT2G03870:EMB2816:Small nuclear ribonucleoprotein family protein 1Chr05:34357418–34361032 (-)1.364e-11
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)1.364e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.358e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.236e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.291e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.915e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.915e-11
Glyma.06G275800 hypothetical protein AT2G30980:SKdZeta:SHAGGY-related protein kinase dZeta 1Chr06:46677753–46682900 (-)3.115e-11
Glyma.06G284900 BZIP50 bZIP transcription factor bZIP50 AT3G58120:BZIP61:Basic-leucine zipper (bZIP) transcription factor family protein__AT2G42380:BZIP34:Basic-leucine zipper… 1Chr06:47339957–47343650 (-)7.197e-12
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)7.166e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)7.166e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)7.166e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)7.166e-11
Glyma.08G182400 hypothetical protein NA 1Chr08:14625596–14626713 (+)8.464e-11
Glyma.13G103200 hypothetical protein AT5G20600:AT5G20600:ribosomal RNA processing-like protein 1Chr13:21822387–21825567 (-)6.054e-11
Glyma.13G133800 hypothetical protein AT3G53520:UXS1:UDP-glucuronic acid decarboxylase 1 1Chr13:24601574–24606756 (-)9.5e-11
Glyma.13G133900 hypothetical protein NA 1Chr13:24613843–24616128 (+)9.5e-11
Glyma.13G134000 hypothetical protein NA 1Chr13:24618272–24619048 (-)9.5e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)5.607e-15
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.681e-16
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)1.681e-16
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)1.681e-16
Glyma.13G180300 hypothetical protein NA 1Chr13:29378090–29379784 (-)5.834e-13
Glyma.13G184500 hypothetical protein NA 1Chr13:29829471–29834027 (+)3.397e-12
Glyma.13G185400 hypothetical protein NA 1Chr13:29936606–29937420 (+)1.132e-12
Glyma.13G200800 hypothetical protein AT2G21510:AT2G21510:DNAJ heat shock N-terminal domain-containing protein 1Chr13:31438634–31445721 (+)9.43e-12
Glyma.13G201300 hypothetical protein NA 1Chr13:31497499–31499001 (+)1.801e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)4.766e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)8.023e-12
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)5.219e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)4.86e-12
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)1.42e-12
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)1.42e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)5.989e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)3.849e-13
Glyma.16G028100 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 1Chr16:2725294–2733429 (-)1.514e-11
Glyma.16G075800 hypothetical protein AT4G19420:AT4G19420:Pectinacetylesterase family protein 1Chr16:7646131–7651379 (+)5.412e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)8.173e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)7.934e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)4.714e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)2.643e-11
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 1Chr19:1148510–1149495 (+)4.899e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.626e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.626e-12
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)3.445e-12
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)1.784e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)3.14e-13