Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P22610

Metabolite ID
P22610
Deionized mass
787.2112 Da
Average m/z
788.2130
Average RT
13.9078
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
82
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

82 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)6.079e-12
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)2.301e-11
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 2Chr04:7187985–7192897 (+)3.267e-13
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)4.814e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)1.795e-14
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)2.781e-15
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)3.538e-15
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)3.538e-15
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)9.881e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)8.084e-13
Glyma.16G209300 hypothetical protein NA 2Chr16:36856833–36863994 (-)2.431e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)6.079e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)3.485e-13
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)3.486e-13
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)1.111e-13
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)6.757e-11
Glyma.04G082800 hypothetical protein NA 1Chr04:6977997–6983005 (-)8.119e-12
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)5.394e-12
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)2.923e-12
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)1.544e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)6.288e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.144e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)1.144e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)1.144e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)3.59e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)4.974e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.072e-16
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.245e-17
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)4.318e-14
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)7.539e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)6.826e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)6.826e-11
Glyma.06G190300 hypothetical protein AT1G74730:AT1G74730:transmembrane protein, putative (DUF1118) 1Chr06:16709212–16710732 (-)4.118e-11
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)6.333e-11
Glyma.06G260900 hypothetical protein NA 1Chr06:44662225–44665728 (-)2.433e-13
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)1.578e-11
Glyma.07G075000 hypothetical protein AT5G60990:AT5G60990:DEA(D/H)-box RNA helicase family protein 1Chr07:6821674–6829551 (-)2.323e-13
Glyma.07G075300 hypothetical protein NA 1Chr07:6843882–6845602 (-)2.323e-13
Glyma.07G075400 hypothetical protein NA 1Chr07:6849233–6853058 (+)3.248e-11
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)6.341e-12
Glyma.08G114800 hypothetical protein AT5G19830:AT5G19830:Peptidyl-tRNA hydrolase family protein 1Chr08:8792663–8798214 (-)3.316e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)4.814e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)4.814e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)4.814e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)4.814e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)3.234e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)9.741e-13
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)9.74e-13
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)2.543e-13
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)2.544e-13
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)4.835e-13
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)4.835e-13
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)8.147e-14
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)3.877e-15
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)2.781e-15
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)3.872e-13
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)8.868e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.886e-14
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.886e-14
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)3.538e-15
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)1.874e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)4.804e-13
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)2.301e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)2.301e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)2.301e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)2.301e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)6.012e-13
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)4.564e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)5.112e-13
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)7.042e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)1.632e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)2.479e-11
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)4.057e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)7.196e-13
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)5.13e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)5.13e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)6.924e-14
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)6.924e-14
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)5.499e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)5.604e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)2.991e-14
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)6.786e-13